added info for setting up the db from DrugCentral.org

.dbeaver/.data-sources.json.bak

@@ -1,31 +1,30 @@
 {
 	"folders": {},
 	"connections": {
-		"postgres-jdbc-186be7b92d8-4d6ef891885b76f5": {
+		"mariaDB-186c896820e-6ff11b5b802d8b82": {
-			"provider": "postgresql",
+			"provider": "mysql",
-			"driver": "postgres-jdbc",
+			"driver": "mariaDB",
-			"name": "aact_db",
+			"name": "rxnav",
 			"save-password": true,
 			"configuration": {
 				"host": "will-office",
-				"port": "5432",
+				"port": "3306",
-				"database": "aact_db",
+				"url": "jdbc:mariadb://will-office:3306/",
-				"url": "jdbc:postgresql://will-office:5432/aact_db",
 				"configurationType": "MANUAL",
 				"type": "dev",
 				"auth-model": "native"
 			}
 		},
-		"mariaDB-186be7ba5a8-7a57b538dcd4188f": {
+		"postgres-jdbc-186c896a347-2a3d946d2dea4df7": {
-			"provider": "mysql",
+			"provider": "postgresql",
-			"driver": "mariaDB",
+			"driver": "postgres-jdbc",
-			"name": "rxnorm_current",
+			"name": "aact_db",
 			"save-password": true,
 			"configuration": {
 				"host": "will-office",
-				"port": "3306",
+				"port": "5432",
-				"database": "rxnorm_current",
+				"database": "aact_db",
-				"url": "jdbc:mariadb://will-office:3306/rxnorm_current",
+				"url": "jdbc:postgresql://will-office:5432/aact_db",
 				"configurationType": "MANUAL",
 				"type": "dev",
 				"auth-model": "native"

.dbeaver/.project-metadata.json.bak

@@ -1 +1 @@
-{"resources":{"development_sql/ASSOICATING NCTIDs to NDCs and Marketing dates.sql":{"default-datasource":"postgres-jdbc-186be7b92d8-4d6ef891885b76f5","default-catalog":"aact_db","default-schema":"public"}}}
+{"resources":{"development_sql/ASSOICATING NCTIDs to NDCs and Marketing dates.sql":{"default-datasource":"postgres-jdbc-186c896a347-2a3d946d2dea4df7","default-catalog":"aact_db","default-schema":"public"}}}

.gitignore

@@ -189,5 +189,9 @@ containers/RxNav-In-a-box/rxnav-in-a-box-*
 #Ignore stuff from AACT_downlaoder
 containers/AACT_downloader/postgresql/*
 containers/AACT_downloader/aact_downloads/*
+#ignore stuff in DrugCentral Downloader
+containers/drugcentral/docker-entrypoint-initdb.d/*.sql
+containers/drugcentral/docker-entrypoint-initdb.d/*.sql.gz
+containers/drugcentral/db_store/*
 
 

containers/drugcentral/docker-compose.yaml

@@ -0,0 +1,23 @@
+version: '3'
+
+networks:
+  pharmaceutical_research: #because it helps to have a way to link specifically to this. 
+
+services:
+  aact_db:
+    image: postgres:14-alpine
+    networks:
+      - pharmaceutical_research
+    container_name: DrugCentral
+    #restart: always #restart after crashes
+    environment:
+      POSTGRES_PASSWORD: root
+    ports:
+      - "54320:5432" #host:container
+    volumes: #host:container is the format.
+      # this is persistant storage for the database  
+      - ./db_store/:/var/lib/postgresql/
+      # this is the folder containing entrypoint info.
+      - ./docker-entrypoint-initdb.d/:/docker-entrypoint-initdb.d/
+
+

containers/drugcentral/init.sh

@@ -0,0 +1,9 @@
+#!/bin/bash
+
+filename="drugcentral.dump.08222022.sql.gz"
+
+cd ./docker-entrypoint-initdb.d/
+
+curl "https://unmtid-shinyapps.net/download/$filename" --output "$filename"
+
+gzip -d $filename