Added more images to assets & included in results.

claude_rewrite
Will King 1 year ago
parent becefe15e0
commit 37d35377b3

@ -16,7 +16,7 @@ Most trials lasted less than 1,500 days, as can be seen in
\ref{fig:trial_durations}.
Although there are a large number of snapshots that will be used to fit the
model, the number of trials -- the unit of observation -- are quite low.
Add to the fact that these are spread over multiple IDC-10 categories
Add to the fact that these are spread over multiple ICD-10 categories
and the overall quantity of trials is quite low.
To continue, we can use a scatterplot to get a rough idea of the observed
@ -26,21 +26,21 @@ the correlation (measured at $0.34$) is apparent.
\begin{figure}[H]
\includegraphics[width=\textwidth]{../assets/img/current/pred_dist_diff-delay}
\includegraphics[width=\textwidth]{../assets/img/HistTrialDurations_Faceted}
\todo{Replace this graphic with the histogram of trial durations}
\caption{Histograms of Trial Durations}
\label{fig:trial_durations}
\end{figure}
\begin{figure}[H]
\includegraphics[width=\textwidth]{../assets/img/current/pred_dist_diff-delay}
\includegraphics[width=\textwidth]{../assets/img/HistSnapshots}
\todo{Replace this graphic with the histogram of snapshots}
\caption{Histogram of the count of Snapshots}
\label{fig:snapshot_counts}
\end{figure}
\begin{figure}[H]
\includegraphics[width=\textwidth]{../assets/img/current/pred_dist_diff-delay}
\includegraphics[width=\textwidth]{../assets/img/SnapshotsVsDurationVsTermination}
\todo{Replace this graphic with the scatterplot comparing durations and snapshots}
\caption{Scatterplot comparing the Count of Snapshots and Trial Duration}
\label{fig:snapshot_counts}
@ -63,15 +63,14 @@ Estimated Baysian Fraction of Missing Information (E-BFMI) ,
suggesting that there are some parts of the posterior distribution
that were not explored well during the model fitting.
I presume this is due to the low number of trials in some of the
IDC-10 categories.
ICD-10 categories.
We can see in Figure \ref{fig:barchart_idc_categories} that some of these
disease categories had a single trial represented while others were
not represented at all.
\begin{figure}[H]
\includegraphics[width=\textwidth]{../assets/img/current/pred_dist_diff-delay}
\todo{Replace this graphic with the barchart of trials by categories.}
\caption{Bar chart of trials by IDC-10 categories}
\includegraphics[width=\textwidth]{../assets/img/CategoryCounts}
\caption{Bar chart of trials by ICD-10 categories}
\label{fig:barchart_idc_categories}
\end{figure}
@ -86,7 +85,7 @@ keeping enrollment open.
\begin{figure}[H]
\includegraphics[width=\textwidth]{../assets/img/current/pred_dist_diff-delay}
\includegraphics[width=\textwidth]{../assets/img/DirectEffects/p_delay_intervention_distdiff_boxplot}
\todo{Replace this graphic with the histdiff with boxplot}
\small{
Values near 1 indicate a near perfect increase in the probability
@ -98,7 +97,7 @@ keeping enrollment open.
from unlikely to terminate under control, to highly likely to
terminate.
}
\caption{Distribution of Predicted Differences}
\caption{Histogram of the Distribution of Predicted Differences}
\label{fig:pred_dist_diff_delay}
\end{figure}
@ -142,7 +141,7 @@ issues with participant enrollment.
If this is the case, we should be able to isolate categories that contribute
the most to this effect.
Another is that this might be a modelling artefact, due to the relatively
low number of trials in certain IDC-10 categories.
low number of trials in certain ICD-10 categories.
In short, there might be high levels of uncertanty in some parameter values,
which manifest as fat tails in the distributions of the $\beta$ parameters.
Because of the logistic format of the model, these fat tails lead to
@ -203,7 +202,7 @@ many, if not all, of the disease categories.
Figure \ref{fig:pred_dist_dif_delay2} shows how this overall
result comes from different disease categories.
\begin{figure}[H]
\includegraphics[width=\textwidth]{../assets/img/current/pred_dist_diff-delay-group}
\includegraphics[width=\textwidth]{../assets/img/DirectEffects/p_delay_intervention_distdiff_by_group}
\caption{Distribution of Predicted differences by Disease Group}
\label{fig:pred_dist_dif_delay2}
\end{figure}

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