diff --git a/Latex/Paper/Main.tex b/Latex/Paper/Main.tex index 3f23eba..6a1db0b 100644 --- a/Latex/Paper/Main.tex +++ b/Latex/Paper/Main.tex @@ -17,16 +17,39 @@ \begin{document} \maketitle -\section{Introduction} -\subfile{sections/00_template} %Pull in introduction - %Describe sections + +%--------------------------------------------------------------- +\section{Introduction}\label{SEC:Results} +%--------------------------------------------------------------- + The paper is organized as follows. Section \ref{SEC:Models}, describes something important. -%\section{Modeling the Environment}\label{SEC:Environment} -\section{Model}\label{SEC:Models} -Section goes here +\subfile{sections/01_Introduction} +%--------------------------------------------------------------- +\section{Literature Review}\label{SEC:LiteratureReview} +%--------------------------------------------------------------- +\subfile{sections/05_LitReview} + +%--------------------------------------------------------------- +\section{Data}\label{SEC:Data} +%--------------------------------------------------------------- +\subfile{sections/02_data} + +%--------------------------------------------------------------- +\section{Causal Identification}\label{SEC:CausalIdentification} +%--------------------------------------------------------------- +\subfile{sections/03_CausalIdentification} + +%--------------------------------------------------------------- +\section{Econometric Model}\label{SEC:EconometricModel} +%--------------------------------------------------------------- +\subfile{sections/04_EconometricModel} + +%--------------------------------------------------------------- +\section{Results}\label{SEC:Results} +%--------------------------------------------------------------- \newpage \section{References} diff --git a/Latex/Paper/sections/01_introduction.tex b/Latex/Paper/sections/01_introduction.tex new file mode 100644 index 0000000..1825d25 --- /dev/null +++ b/Latex/Paper/sections/01_introduction.tex @@ -0,0 +1,12 @@ +\documentclass[../Main.tex]{subfiles} +\graphicspath{{\subfix{Assets/img/}}} + +\begin{document} +In September of 2019, the European Space Agency (ESA) released a tweet +explaining that they had performed an appendicotomy in space using +nothing more than radiation from the sun. +They are sad to announce that the patient died due to complications from +exposure to the cold vaccum of space. + + +\end{document} diff --git a/Latex/Paper/sections/02_data.tex b/Latex/Paper/sections/02_data.tex new file mode 100644 index 0000000..3d58ce0 --- /dev/null +++ b/Latex/Paper/sections/02_data.tex @@ -0,0 +1,12 @@ +\documentclass[../Main.tex]{subfiles} +\graphicspath{{\subfix{Assets/img/}}} + +\begin{document} +%Classes of data +% Trial Dynamics/snapshots +% Drugs on Market +% Market/Population Size +% Compounds, interactions + + +\end{document} diff --git a/Latex/Paper/sections/03_CausalIdentification.tex b/Latex/Paper/sections/03_CausalIdentification.tex new file mode 100644 index 0000000..4c0e828 --- /dev/null +++ b/Latex/Paper/sections/03_CausalIdentification.tex @@ -0,0 +1,13 @@ +\documentclass[../Main.tex]{subfiles} +\graphicspath{{\subfix{Assets/img/}}} + +\begin{document} + + +\begin{figure}[h] + \tikzfig{../assets/tikzit/CausalGraph} + \caption{Causal Model} + \label{Fig:CausalModel} +\end{figure} + +\end{document} diff --git a/Latex/Paper/sections/04_EconometricModel.tex b/Latex/Paper/sections/04_EconometricModel.tex new file mode 100644 index 0000000..1825d25 --- /dev/null +++ b/Latex/Paper/sections/04_EconometricModel.tex @@ -0,0 +1,12 @@ +\documentclass[../Main.tex]{subfiles} +\graphicspath{{\subfix{Assets/img/}}} + +\begin{document} +In September of 2019, the European Space Agency (ESA) released a tweet +explaining that they had performed an appendicotomy in space using +nothing more than radiation from the sun. +They are sad to announce that the patient died due to complications from +exposure to the cold vaccum of space. + + +\end{document} diff --git a/Latex/Paper/sections/05_LitReview.tex b/Latex/Paper/sections/05_LitReview.tex new file mode 100644 index 0000000..4c42fca --- /dev/null +++ b/Latex/Paper/sections/05_LitReview.tex @@ -0,0 +1,19 @@ +\documentclass[../Main.tex]{subfiles} +\graphicspath{{\subfix{Assets/img/}}} + +%%%%% Organization %%%%% +% First read and write personal notes. +% Then organizing/tagging the literature along these axes +% - Trial and Trial Sequence Completion/success rates +% - R&D efforts +% - FIND MORE +% - +% +% Now figure out the order in which to present them and what they explain. +% Now sumarize each one, within the context of the literature around it. +% Now write them out together +\begin{document} +TODO + + +\end{document} diff --git a/Latex/Paper/sections/06_Results.tex b/Latex/Paper/sections/06_Results.tex new file mode 100644 index 0000000..1825d25 --- /dev/null +++ b/Latex/Paper/sections/06_Results.tex @@ -0,0 +1,12 @@ +\documentclass[../Main.tex]{subfiles} +\graphicspath{{\subfix{Assets/img/}}} + +\begin{document} +In September of 2019, the European Space Agency (ESA) released a tweet +explaining that they had performed an appendicotomy in space using +nothing more than radiation from the sun. +They are sad to announce that the patient died due to complications from +exposure to the cold vaccum of space. + + +\end{document} diff --git a/Latex/assets/tikzit/CausalGraph.tikz b/Latex/assets/tikzit/CausalGraph.tikz new file mode 100644 index 0000000..74adc31 --- /dev/null +++ b/Latex/assets/tikzit/CausalGraph.tikz @@ -0,0 +1,33 @@ +\begin{tikzpicture} + \begin{pgfonlayer}{nodelayer} + \node [style=emptyBox] (0) at (-18.5, 4) {Compound Safety}; + \node [style=emptyBox] (1) at (-18.5, -3.5) {Compound Effectiveness}; + \node [style=emptyBox] (2) at (5, 0.75) {Population Size}; + \node [style=Red Box] (3) at (-3.75, -3.5) {\begin{tabular}{l} Conclusion \\ $\bullet$ Status\\ $\bullet$ Duration \\ $\bullet$ Enrollment \end{tabular}}; + \node [style=Red Box] (4) at (-3.75, 1) {Snapshot Enrollment}; + \node [style=Red Box] (5) at (3.25, -2) {Market Conditions}; + \node [style=Box] (6) at (-17.5, -5.5) {Sponsor Changes}; + \node [style=Box] (7) at (-15.25, 0.25) {\begin{tabular}{l}Prior \\ Trials \end{tabular}}; + \node [style=emptyBox] (8) at (-2.25, 4) {Beliefs about Compound}; + \node [style=Box] (9) at (-10.75, 4) {Adverse Events}; + \node [style=emptyBox] (10) at (3.25, -5.25) {Unobserved}; + \node [style=Box] (11) at (3.25, -6.25) {Observed: Control}; + \node [style=Red Box] (12) at (3.25, -7.25) {Observed: Of interest}; + \node [style=emptyBox] (13) at (-10.75, 5.25) {Adverse Events}; + \end{pgfonlayer} + \begin{pgfonlayer}{edgelayer} + \draw [style=RightArrow] (4) to (3); + \draw [style=RightArrow] (5) to (3); + \draw [style=Light Arrow] (2) to (5); + \draw [style=Light Arrow] (2) to (4); + \draw [style=Light Arrow] (5) to (4); + \draw [style=Light Arrow] (0) to (7); + \draw [style=Light Arrow] (1) to (7); + \draw [style=Light Arrow] (7) to (8); + \draw [style=Light Arrow] (8) to (4); + \draw [style=Light Arrow] (1) to (3); + \draw [style=Light Arrow] (6) to (3); + \draw [style=Light Arrow] (0) to (9); + \draw [style=Light Arrow] (9) to (3); + \end{pgfonlayer} +\end{tikzpicture}