This is used to build tools which process and standardize data.

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youainti 4ae3064bf2 Got the historical downloader working (fixed an sql issue) and setup tools to select trials.		3 years ago
AACT_downloader	reworked docker compose	3 years ago
Orangebook	justfile will download, create, and populate db with AACT data	3 years ago
Parser	checking everything in	4 years ago
assorted	Reorganized folder system. added an assorted section to help keep track of useful sql etc.	4 years ago
classifications	justfile will download, create, and populate db with AACT data	3 years ago
history_downloader	Got the historical downloader working (fixed an sql issue) and setup tools to select trials.	3 years ago
.gitignore	Added a justfile, adjusted docker networks, restructured how data is downloaded	3 years ago
README.md	Got the historical downloader working (fixed an sql issue) and setup tools to select trials.	3 years ago
data-graph	added graph of data linkages	4 years ago
justfile	Got the historical downloader working (fixed an sql issue) and setup tools to select trials.	3 years ago

ClinicalTrialsDataProcessing

This represents my

Prerequisites

Python >= 3.8 Docker >= 20.10 Curl >= 7 Just >= 1.9

Check prerequisites

just check-status

Setup the underlying AACT database including downloading historical data.

just create
just select-trials

finish advanced usage add a section describing networking