Create a script that intitializes the database. #5

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opened 4 years ago by youainti · 3 comments
youainti commented 4 years ago (Migrated from gitea.kgjk.icu)

Create a dockerfile that sets up the database, then runs scripts to configure the database, incliding

  • adding base AACT data.

Set it up as a dockerfile so that it can be published seperately.
https://stackoverflow.com/questions/57342238/how-to-start-with-docker-dockerfile-and-docker-compose

Create a dockerfile that sets up the database, then runs scripts to configure the database, incliding - [ ] adding base AACT data. Set it up as a dockerfile so that it can be published seperately. https://stackoverflow.com/questions/57342238/how-to-start-with-docker-dockerfile-and-docker-compose
youainti commented 4 years ago (Migrated from gitea.kgjk.icu)
more info https://jpdeffo.medium.com/dockerfile-and-docker-compose-file-in-a-nutshell-4b2916cb35fe
youainti commented 4 years ago (Migrated from gitea.kgjk.icu)

My thought is that if I set this up as a dockerfile, I may be able to add more confiuration option.

My thought is that if I set this up as a dockerfile, I may be able to add more confiuration option.
youainti commented 4 years ago (Migrated from gitea.kgjk.icu)

Done.

Final archetecture was to use a dockerfile to construct the aact database, and inherit from it with another dockerfile to create the results. A docker-compose file was then written to initialize it with all the required data and the pgadmin utility.

see 0bd7965112 for the commit I used.

Done. Final archetecture was to use a dockerfile to construct the aact database, and inherit from it with another dockerfile to create the results. A docker-compose file was then written to initialize it with all the required data and the pgadmin utility. see 0bd7965112 for the commit I used.
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Reference: youainti/ClinicalTrialsDataProcessing#5
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