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Design Spec for v1.0.0 #28

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opened 3 years ago by youainti · 1 comments
youainti commented 3 years ago (Migrated from gitea.kgjk.icu)

Details

Clinical Trials Data

  • Scripts to download and setup AACT database in postgres
  • Script to record which trials to use in DB
  • Script to download historical trial information
  • Script to parse historical trials data.

Completed with release v0.5

  • Link trial compounds to MESH terms
  • Link trial indications to MESH terms
  • Link indications to WHO taxonomy

Market Data

  • Download data about which compounds were on the market and their approved indications
  • Figure out which MESH data is needed
  • Link Compounds to MESH terms
  • Lint Indications to MESH terms
  • Link indications to WHO taxonomy
  • Incorporate WHO burdent of disease survey to calculate a "population size" for an indication.
# Details ## Clinical Trials Data - [x] Scripts to download and setup AACT database in postgres - [x] Script to record which trials to use in DB - [x] Script to download historical trial information - [x] Script to parse historical trials data. Completed with release v0.5 - [x] Link trial compounds to MESH terms - [x] Link trial indications to MESH terms - [x] Link indications to WHO taxonomy ## Market Data - [x] Download data about which compounds were on the market and their approved indications - [x] Figure out which MESH data is needed - [x] Link Compounds to MESH terms - [x] Lint Indications to MESH terms - [x] Link indications to WHO taxonomy - [x] Incorporate WHO burdent of disease survey to calculate a "population size" for an indication.
youainti commented 3 years ago (Migrated from gitea.kgjk.icu)

Linked it all together.

Linked it all together.
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Reference: youainti/ClinicalTrialsDataProcessing#28
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