Linking again after changing remotes
Merge branch 'main' of https://git.youainti.com/youainti/ClinicalTrialsDataProcessing into mainllm-extraction
youainti
3 years ago
commit
a336fb92d9
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{"resources":{"Scripts/DiseaseBurdens_create_table.sql":{"default-datasource":"postgres-jdbc-186c896a347-2a3d946d2dea4df7","default-catalog":"aact_db","default-schema":"public"},"Scripts/GlobalBurdensOfDisease2019Codebook.sql":{"default-datasource":"postgres-jdbc-186c896a347-2a3d946d2dea4df7","default-catalog":"aact_db","default-schema":"DiseaseBurden"},"development_sql/ASSOICATING NCTIDs to NDCs and Marketing dates.sql":{"default-schema":"public","default-datasource":"postgres-jdbc-186c896a347-2a3d946d2dea4df7","default-catalog":"aact_db"}}}
|
||||
{"resources":{"Scripts/ASSOICATING NCTIDs to NDCs and Marketing dates.sql":{"default-datasource":"postgres-jdbc-186c896a347-2a3d946d2dea4df7","default-catalog":"aact_db","default-schema":"public"},"Scripts/Data_summaries.sql":{"default-datasource":"postgres-jdbc-186c896a347-2a3d946d2dea4df7","default-catalog":"aact_db","default-schema":"public"},"Scripts/DevelopingLinks.sql":{"default-schema":"public","default-datasource":"postgres-jdbc-186c896a347-2a3d946d2dea4df7","default-catalog":"aact_db"},"Scripts/DiseaseBurdens_create_table.sql":{"default-schema":"public","default-datasource":"postgres-jdbc-186c896a347-2a3d946d2dea4df7","default-catalog":"aact_db"},"Scripts/GlobalBurdensOfDisease2019Codebook.sql":{"default-schema":"DiseaseBurden","default-datasource":"postgres-jdbc-186c896a347-2a3d946d2dea4df7","default-catalog":"aact_db"},"Scripts/GroupingTrials.sql":{"default-datasource":"postgres-jdbc-186c896a347-2a3d946d2dea4df7","default-catalog":"aact_db","default-schema":"public"},"Scripts/Script.sql":{"default-datasource":"postgres-jdbc-186c896a347-2a3d946d2dea4df7","default-catalog":"aact_db","default-schema":"public"},"Scripts/TablesAndViews_Public.sql":{"default-datasource":"postgres-jdbc-186c896a347-2a3d946d2dea4df7","default-catalog":"aact_db","default-schema":"public"},"development_sql/ASSOICATING NCTIDs to NDCs and Marketing dates.sql":{"default-schema":"public","default-datasource":"postgres-jdbc-186c896a347-2a3d946d2dea4df7","default-catalog":"aact_db"}}}
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@ -0,0 +1,658 @@
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create extension tablefunc;
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/*Getting Trial Data all together
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* There are 3 main datasets to join per trial:
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*
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* - Trial Data (still need to stick it together)
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* - Duration and enrollment data
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* - Compound Marketing (can get for any trial)
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* - how many individual brands per compound at the start of the trial
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* - Disease Data (can get for verified trials)
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* - Population upper limit (Global Burdens of Disease)
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* - Category (ICD10 2nd level groups)
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*/
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/*Disease Data*/
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-- ICD10 Category and GBD data
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with cte as (
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select
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nct_id,
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max("level") as max_level
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from trial_to_cause
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group by nct_id
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), cte2 as (
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select
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ttc.nct_id,
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ttc.ui,
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ttc."condition",
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ttc.cause_text,
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ttc.cause_id,
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cte.max_level
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from trial_to_cause ttc
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join cte
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on cte.nct_id=ttc.nct_id
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where ttc."level"=cte.max_level
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group by
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ttc.nct_id,
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ttc.ui,
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ttc."condition",
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ttc.cause_text,
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ttc.cause_id,
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cte.max_level
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order by nct_id,ui
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), cte3 as (
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select
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nct_id,
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substring(cte2.ui for 3) as code,
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cte2."condition",
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cte2.cause_text,
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cte2.cause_id,
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ic.id as category_id,
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ic.group_name
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from cte2
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join "DiseaseBurden".icd10_categories ic
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on
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substring(cte2.ui for 3) <= ic.end_code
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and
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substring(cte2.ui for 3) >= ic.start_code
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)
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select nct_id, cause_id,category_id
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from cte3
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group by nct_id, cause_id, category_id
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;
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--still need to link to actual disease burdens.
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/*Compound Marketing Data*/
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---Number of trials after a certain date
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with marketing_cte as (
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select nct_id,count(distinct application_number_or_citation)
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from public.match_trial_to_marketing_start_date mttmsd
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where "min" > '2012-06-01'
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group by nct_id
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)
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select * from marketing_cte
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;
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/*Get versions*/
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/* Ignore this version
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with cte1 as (
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select nct_id,min("version") over (partition by nct_id) as min_version
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from history.trial_snapshots ts
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where
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ts.start_date < ts.submission_date
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), cte2 as (
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select * from cte1
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group by nct_id, min_version
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order by nct_id
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), cte3 as (
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select
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ts2.nct_id,
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ts2."version",
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ts2.overall_status,
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ts2.submission_date,
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ts2.start_date,
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ts2.enrollment,
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ts2.enrollment_category,
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ts2.primary_completion_date,
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ts2.primary_completion_date_category ,
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--mv.nct_id,
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mv.min_version
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from history.trial_snapshots ts2
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join cte2 mv
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on mv.nct_id = ts2.nct_id
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where
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ts2."version" = mv.min_version
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order by ts2.nct_id
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), cte4 as (
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select cte3.nct_id, cte3.submission_date - cte3.start_date as submission_presecence
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from cte3
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)
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select avg(submission_presecence)
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from cte4
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;
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--avg 61 day difference
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*/
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--use this version
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with cte1 as ( --get trials
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select nct_id,max("version") over (partition by nct_id) as min_version
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from history.trial_snapshots ts
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where
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ts.start_date > ts.submission_date
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), cte2 as ( --
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select * from cte1
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group by nct_id, min_version
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order by nct_id
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), cte3 as (
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select
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ts2.nct_id,
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ts2."version",
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ts2.overall_status,
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ts2.submission_date,
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ts2.start_date,
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ts2.enrollment,
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ts2.enrollment_category,
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ts2.primary_completion_date,
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ts2.primary_completion_date_category ,
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--mv.nct_id,
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mv.min_version
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from history.trial_snapshots ts2
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join cte2 mv
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on mv.nct_id = ts2.nct_id
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where
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ts2."version" = mv.min_version
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order by ts2.nct_id
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)
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select *
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from cte3
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where
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enrollment is null
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or enrollment_category is null
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or primary_completion_date is null
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or primary_completion_date_category is null
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or start_date is null
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/*, cte4 as (
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select cte3.nct_id, cte3.submission_date - cte3.start_date as submission_presecence
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from cte3
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)
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select avg(submission_presecence)
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from cte4
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; -- -33 day difference on average
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*/
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with cte1_min as (
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select nct_id,min("version") over (partition by nct_id) as min_version
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from history.trial_snapshots ts
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where
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ts.start_date <= ts.submission_date
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),cte1_max as (
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select nct_id,max("version") over (partition by nct_id) as max_version
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from history.trial_snapshots ts
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where
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ts.start_date >= ts.submission_date
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), cte2_min as (
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select * from cte1_min
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group by nct_id, min_version
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), cte2_max as (
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select * from cte1_max
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group by nct_id, max_version
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)
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select *
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from cte2_min
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join cte2_max
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on cte2_min.nct_id=cte2_max.nct_id
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where min_version >= max_version
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/* Neet to take a different tack in filling out the is version of the data.
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* The idea is that we need the latest of each major category
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* before the start date.
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* */
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--get the set of trials which have
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with cte as (
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/* Get the absolute difference between the start date and the
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* submission_date for each version of the trial (measured in days)
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*
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*/
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select
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s.nct_id,
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s.start_date,
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ts."version",
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ts.submission_date,
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abs(extract(epoch from ts.submission_date - s.start_date)::float/(24*60*60)) as start_deviance
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from ctgov.studies s
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join history.trial_snapshots ts
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on s.nct_id = ts.nct_id
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where s.nct_id in (select distinct nct_id from "DiseaseBurden".trial_to_icd10 tti)
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),cte2 as (
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/* Rank each version based on it's proximity to the start date
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* */
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select
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cte.nct_id,
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cte."version",
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row_number() over (partition by cte.nct_id order by cte.start_deviance) as rownum,
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cte.submission_date,
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cte.start_deviance,
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cte.start_date,
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ts.primary_completion_date ,
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ts.primary_completion_date_category ,
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ts.overall_status ,
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ts.enrollment ,
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ts.enrollment_category
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from cte
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join history.trial_snapshots ts
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on cte.nct_id=ts.nct_id and cte."version"=ts."version"
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), cte3_primary_completion as (
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/* for each trial
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* select the version with a filled out primary_completion_source
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* that is closest to the start date.
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* */
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select cte2.nct_id, min(cte2.rownum) as primary_completion_source
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from cte2
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where cte2.primary_completion_date is not null
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group by cte2.nct_id
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), cte3_enrollment as (
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/* for each trial
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* select the version with a filled out enrollment
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* that is closest to the start date.
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* */
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select cte2.nct_id, min(cte2.rownum) as enrollment_source
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from cte2
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where cte2.enrollment is not null
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group by cte2.nct_id
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), cte4 as (
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/* join the best options together to get the data of interest.
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*
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* On further inspection there are just a view of those, with
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* many of them having a 7+ month difference between the two versions.
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* I think I am going to drop them.
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* */
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select
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c3e.nct_id,
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--c2a.submission_date as submission_date_a,
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--c2b.submission_date as submission_date_b,
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--c3e.enrollment_source,
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c2a."version" as version_a,
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c2a.enrollment,
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c2a.enrollment_category,
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--c3p.primary_completion_source ,
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c2b."version" as version_b,
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c2b.primary_completion_date,
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c2b.primary_completion_date_category
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from cte3_enrollment c3e
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join cte2 c2a
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on c3e.nct_id = c2a.nct_id and c3e.enrollment_source = c2a.rownum
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join cte3_primary_completion c3p
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on c3e.nct_id = c3p.nct_id
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join cte2 c2b
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on c3p.nct_id=c2b.nct_id and c3p.primary_completion_source = c2b.rownum
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), cte5 as (
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select nct_id
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from cte4 where version_a != version_b
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)
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select
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c.nct_id,
|
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s2.overall_status,
|
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c.enrollment as planned_enrollment,
|
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s2.enrollment,
|
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s2.start_date,
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c.primary_completion_date as planned_primary_completion_date,
|
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s2.primary_completion_date,
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extract(epoch from c.primary_completion_date - s2.start_date)/(24*60*60) as planned_duration,
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s2.primary_completion_date - s2.start_date as actual_duration
|
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from cte4 c
|
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join ctgov.studies s2
|
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on c.nct_id = s2.nct_id
|
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where c.nct_id not in (select nct_id from cte5)
|
||||
;
|
||||
|
||||
|
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/*
|
||||
* Concern about causal inference
|
||||
*
|
||||
* When putting the data together for CBO it looked like we got occasional updates about
|
||||
* the status of trials that included enrollment updates.
|
||||
* That doesn't appear to be the case, but that messes with the ability to causally identify
|
||||
* any results. I need to be careful about this data is used.
|
||||
*
|
||||
* I created the statements below to get the data that I need.
|
||||
*/
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||||
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||||
|
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|
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----get the set of trial snapshots
|
||||
create or replace view public.view_cte as
|
||||
select
|
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nct_id,
|
||||
primary_completion_date,
|
||||
primary_completion_date_category,
|
||||
enrollment,
|
||||
start_date,
|
||||
enrollment_category ,
|
||||
overall_status,
|
||||
--count("version"),
|
||||
min(submission_date) as earliest_date_observed
|
||||
from history.trial_snapshots ts
|
||||
where
|
||||
nct_id in (select distinct nct_id from "DiseaseBurden".trial_to_icd10 tti where tti.approved='accepted')
|
||||
and submission_date >= start_date
|
||||
and overall_status not in ('Completed','Terminated')
|
||||
group by
|
||||
nct_id,
|
||||
primary_completion_date,
|
||||
primary_completion_date_category,
|
||||
start_date,
|
||||
enrollment,
|
||||
enrollment_category ,
|
||||
overall_status
|
||||
;
|
||||
create or replace view public.view_disbur_cte0 as
|
||||
select tti.nct_id, tti.ui , tti."condition",itc.cause_text, ch.cause_id, ch."level"
|
||||
from "DiseaseBurden".trial_to_icd10 tti
|
||||
join "DiseaseBurden".icd10_to_cause itc
|
||||
on replace(REPLACE(tti.ui,'-',''),'.','') = replace(REPLACE(itc.code ,'-',''),'.','')
|
||||
join "DiseaseBurden".cause_hierarchy ch
|
||||
on itc.cause_text = ch.cause_name
|
||||
where
|
||||
tti.approved = 'accepted'
|
||||
;
|
||||
create or replace view public.view_trial_to_cause as
|
||||
select tti.nct_id, tti.ui , tti."condition",itc.cause_text, ch.cause_id, ch."level"
|
||||
from "DiseaseBurden".trial_to_icd10 tti
|
||||
join "DiseaseBurden".icd10_to_cause itc
|
||||
on replace(REPLACE(tti.ui,'-',''),'.','') = replace(REPLACE(itc.code ,'-',''),'.','')
|
||||
join "DiseaseBurden".cause_hierarchy ch
|
||||
on itc.cause_text = ch.cause_name
|
||||
where
|
||||
tti.approved = 'accepted'
|
||||
order by nct_id
|
||||
;--does this duplicate the view above?
|
||||
|
||||
create or replace view public.view_disbur_cte as
|
||||
select
|
||||
nct_id,
|
||||
max("level") as max_level
|
||||
from view_disbur_cte0
|
||||
group by nct_id
|
||||
|
||||
;
|
||||
create or replace view public.view_disbur_cte2 as
|
||||
select
|
||||
ttc.nct_id,
|
||||
ttc.ui,
|
||||
ttc."condition",
|
||||
ttc.cause_text,
|
||||
ttc.cause_id,
|
||||
disbur_cte.max_level
|
||||
from view_trial_to_cause ttc
|
||||
join view_disbur_cte as disbur_cte
|
||||
on disbur_cte.nct_id=ttc.nct_id
|
||||
where ttc."level"=disbur_cte.max_level
|
||||
group by
|
||||
ttc.nct_id,
|
||||
ttc.ui,
|
||||
ttc."condition",
|
||||
ttc.cause_text,
|
||||
ttc.cause_id,
|
||||
disbur_cte.max_level
|
||||
order by nct_id,ui
|
||||
;
|
||||
create or replace view public.view_disbur_cte3 as
|
||||
select
|
||||
nct_id,
|
||||
substring(disbur_cte2.ui for 3) as code,
|
||||
disbur_cte2."condition",
|
||||
disbur_cte2.cause_text,
|
||||
disbur_cte2.cause_id,
|
||||
ic.chapter_code as category_id,
|
||||
ic.group_name,
|
||||
disbur_cte2.max_level
|
||||
from view_disbur_cte2 as disbur_cte2
|
||||
join "DiseaseBurden".icd10_categories ic
|
||||
on
|
||||
substring(disbur_cte2.ui for 3) <= ic.end_code
|
||||
and
|
||||
substring(disbur_cte2.ui for 3) >= ic.start_code
|
||||
where ic."level" = 1
|
||||
|
||||
;
|
||||
create or replace view public.view_burdens_cte as
|
||||
select *
|
||||
from "DiseaseBurden".burdens b
|
||||
where b.sex_id = 3 --both sexes
|
||||
and b.metric_id = 1 --number/count
|
||||
and b.measure_id = 2 --DALYs
|
||||
and b.age_id =22 --all ages
|
||||
;
|
||||
create or replace view public.view_burdens_cte2 as
|
||||
select
|
||||
--c1.location_id,
|
||||
c1.cause_id,
|
||||
c1."year",
|
||||
--high sdi
|
||||
c1.val as h_sdi_val,
|
||||
c1.upper_95 as h_sdi_u95,
|
||||
c1.lower_95 as h_sdi_l95,
|
||||
--high-middle sdi
|
||||
c2.val as hm_sdi_val,
|
||||
c2.upper_95 as hm_sdi_u95,
|
||||
c2.lower_95 as hm_sdi_l95,
|
||||
--middle sdi
|
||||
c3.val as m_sdi_val,
|
||||
c3.upper_95 as m_sdi_u95,
|
||||
c3.lower_95 as m_sdi_l95,
|
||||
--low-middle sdi
|
||||
c4.val as lm_sdi_val,
|
||||
c4.upper_95 as lm_sdi_u95,
|
||||
c4.lower_95 as lm_sdi_l95,
|
||||
--low sdi
|
||||
c5.val as l_sdi_val,
|
||||
c5.upper_95 as l_sdi_u95,
|
||||
c5.lower_95 as l_sdi_l95
|
||||
from view_burdens_cte c1
|
||||
join view_burdens_cte c2
|
||||
on c1.cause_id = c2.cause_id
|
||||
and c1."year" = c2."year"
|
||||
join view_burdens_cte c3
|
||||
on c1.cause_id = c3.cause_id
|
||||
and c1."year" = c3."year"
|
||||
join view_burdens_cte c4
|
||||
on c1.cause_id = c4.cause_id
|
||||
and c1."year" = c4."year"
|
||||
join view_burdens_cte c5
|
||||
on c1.cause_id = c5.cause_id
|
||||
and c1."year" = c5."year"
|
||||
where c1.location_id = 44635
|
||||
and c2.location_id = 44634
|
||||
and c3.location_id = 44639
|
||||
and c4.location_id = 44636
|
||||
and c5.location_id = 44637
|
||||
;
|
||||
--drop view if exists public.formatted_data cascade;
|
||||
create or replace view public.formatted_data as
|
||||
select
|
||||
cte.nct_id,
|
||||
cte.start_date,
|
||||
cte.enrollment as current_enrollment,
|
||||
cte.enrollment_category,
|
||||
cte.overall_status as current_status,
|
||||
cte.earliest_date_observed,
|
||||
extract( epoch from (cte.earliest_date_observed - cte.start_date))/extract( epoch from (cte.primary_completion_date - cte.start_date)) as elapsed_duration
|
||||
,count(distinct mttmsd."application_number_or_citation") as n_brands
|
||||
,dbc3.code
|
||||
,dbc3."condition"
|
||||
,dbc3.cause_text
|
||||
,dbc3.cause_id
|
||||
,dbc3.category_id
|
||||
,dbc3.group_name
|
||||
,dbc3.max_level
|
||||
--c1.location_id,
|
||||
--,b.cause_id
|
||||
,b."year",
|
||||
--high sdi
|
||||
b.h_sdi_val,
|
||||
b.h_sdi_u95,
|
||||
b.h_sdi_l95,
|
||||
--high-middle sdi
|
||||
b.hm_sdi_val,
|
||||
b.hm_sdi_u95,
|
||||
b.hm_sdi_l95,
|
||||
--middle sdi
|
||||
b.m_sdi_val,
|
||||
b.m_sdi_u95,
|
||||
b.m_sdi_l95,
|
||||
--low-middle sdi
|
||||
b.lm_sdi_val,
|
||||
b.lm_sdi_u95,
|
||||
b.lm_sdi_l95,
|
||||
--low sdi
|
||||
b.l_sdi_val,
|
||||
b.l_sdi_u95,
|
||||
b.l_sdi_l95
|
||||
from view_cte as cte
|
||||
join public.match_trial_to_marketing_start_date mttmsd
|
||||
on cte.nct_id = mttmsd."nct_id"
|
||||
join view_disbur_cte3 dbc3
|
||||
on dbc3.nct_id = cte.nct_id
|
||||
join view_burdens_cte2 b
|
||||
on b.cause_id = dbc3.cause_id and extract(year from b."year") = extract(year from cte.earliest_date_observed)
|
||||
where
|
||||
mttmsd."min" <= cte.earliest_date_observed
|
||||
group by
|
||||
cte.nct_id,
|
||||
cte.start_date,
|
||||
cte.enrollment,
|
||||
cte.enrollment_category,
|
||||
cte.overall_status,
|
||||
cte.earliest_date_observed,
|
||||
elapsed_duration
|
||||
,dbc3.code
|
||||
,dbc3."condition"
|
||||
,dbc3.cause_text
|
||||
,dbc3.cause_id
|
||||
,dbc3.category_id
|
||||
,dbc3.group_name
|
||||
,dbc3.max_level
|
||||
--c1.location_id,
|
||||
,b.cause_id,
|
||||
b."year",
|
||||
--high sdi
|
||||
b.h_sdi_val,
|
||||
b.h_sdi_u95,
|
||||
b.h_sdi_l95,
|
||||
--high-middle sdi
|
||||
b.hm_sdi_val,
|
||||
b.hm_sdi_u95,
|
||||
b.hm_sdi_l95,
|
||||
--middle sdi
|
||||
b.m_sdi_val,
|
||||
b.m_sdi_u95,
|
||||
b.m_sdi_l95,
|
||||
--low-middle sdi
|
||||
b.lm_sdi_val,
|
||||
b.lm_sdi_u95,
|
||||
b.lm_sdi_l95,
|
||||
--low sdi
|
||||
b.l_sdi_val,
|
||||
b.l_sdi_u95,
|
||||
b.l_sdi_l95
|
||||
order by cte.nct_id ,cte.earliest_date_observed
|
||||
;--used this one 2023-04-05
|
||||
--get the planned enrollment
|
||||
create or replace view public.time_between_submission_and_start_view as
|
||||
/* Get the absolute difference between the start date and the
|
||||
* submission_date for each version of the trial (measured in days)
|
||||
*
|
||||
*/
|
||||
select
|
||||
s.nct_id,
|
||||
s.start_date,
|
||||
ts."version",
|
||||
ts.submission_date,
|
||||
abs(extract(epoch from ts.submission_date - s.start_date)::float/(24*60*60)) as start_deviance
|
||||
from ctgov.studies s
|
||||
join history.trial_snapshots ts
|
||||
on s.nct_id = ts.nct_id
|
||||
where s.nct_id in (select distinct nct_id from "DiseaseBurden".trial_to_icd10 tti)
|
||||
;
|
||||
create or replace view rank_proximity_to_start_time_view as
|
||||
/* Rank each version based on it's proximity to the start date
|
||||
* */
|
||||
select
|
||||
cte.nct_id,
|
||||
cte."version",
|
||||
row_number() over (partition by cte.nct_id order by cte.start_deviance) as rownum,
|
||||
cte.submission_date,
|
||||
cte.start_deviance,
|
||||
cte.start_date,
|
||||
ts.primary_completion_date ,
|
||||
ts.primary_completion_date_category ,
|
||||
ts.overall_status ,
|
||||
ts.enrollment ,
|
||||
ts.enrollment_category
|
||||
from public.time_between_submission_and_start_view cte
|
||||
join history.trial_snapshots ts
|
||||
on cte.nct_id=ts.nct_id and cte."version"=ts."version"
|
||||
;
|
||||
create or replace view enrollment_closest_to_start_view as
|
||||
/* for each trial
|
||||
* select the version with a filled out enrollment
|
||||
* that is closest to the start date.
|
||||
* */
|
||||
select cte2.nct_id, min(cte2.rownum) as enrollment_source
|
||||
from rank_proximity_to_start_time_view cte2
|
||||
where cte2.enrollment is not null
|
||||
group by cte2.nct_id
|
||||
;
|
||||
--drop view public.formatted_data_with_planned_enrollment ;
|
||||
create or replace view formatted_data_with_planned_enrollment as
|
||||
select
|
||||
f.*,
|
||||
s.overall_status as final_status,
|
||||
c2a."version",
|
||||
c2a.enrollment as planned_enrollment
|
||||
from formatted_data f
|
||||
join ctgov.studies s
|
||||
on f.nct_id = s.nct_id
|
||||
join enrollment_closest_to_start_view c3e
|
||||
on c3e.nct_id = f.nct_id
|
||||
join rank_proximity_to_start_time_view c2a
|
||||
on c3e.nct_id = c2a.nct_id and c3e.enrollment_source = c2a.rownum
|
||||
;
|
||||
select * from formatted_data_with_planned_enrollment
|
||||
|
||||
-------------------GET COUNTS------------------
|
||||
select count(distinct nct_id) from public.view_cte; --88
|
||||
select count(distinct nct_id) from public.view_disbur_cte0; --130
|
||||
select count(distinct nct_id) from public.view_trial_to_cause; --130
|
||||
select count(distinct nct_id) from public.view_disbur_cte;--130
|
||||
select count(distinct nct_id) from public.view_disbur_cte2;--130
|
||||
select count(distinct nct_id) from public.view_disbur_cte3;--130
|
||||
select count(distinct nct_id) from public.formatted_data; --48 probably because there are so many trials that don't fall into a GBD category/cause
|
||||
select count(distinct nct_id) from public.time_between_submission_and_start_view;--1067
|
||||
select count(distinct nct_id) from rank_proximity_to_start_time_view;--1067
|
||||
select count(distinct nct_id) from enrollment_closest_to_start_view;--1067
|
||||
select count(distinct nct_id) from formatted_data_with_planned_enrollment;--48
|
||||
|
||||
|
||||
|
||||
select count(distinct nct_id) from public.view_trial_to_cause; --130
|
||||
select count(distinct nct_id) from formatted_data_with_planned_enrollment;--48
|
||||
|
||||
|
||||
--get durations and count snapshots per trial per trial
|
||||
with cte1 as (
|
||||
select
|
||||
nct_id,
|
||||
start_date ,
|
||||
primary_completion_date,
|
||||
overall_status ,
|
||||
primary_completion_date - start_date as duration
|
||||
from ctgov.studies s
|
||||
where nct_id in (select distinct nct_id from http.download_status ds)
|
||||
), cte2 as (
|
||||
select nct_id,count(*) as snapshot_count from formatted_data_with_planned_enrollment fdwpe
|
||||
group by nct_id
|
||||
)
|
||||
select a.nct_id, a.overall_status, a.duration,b.snapshot_count
|
||||
from cte1 as a
|
||||
join cte2 as b
|
||||
on a.nct_id=b.nct_id
|
||||
;
|
||||
@ -0,0 +1,83 @@
|
||||
|
||||
drop view if exists public.match_trial_to_marketing_start_date;
|
||||
DROP VIEW if exists public.match_trial_to_ndc11;
|
||||
drop view if exists public.match_trials_to_bn_in;
|
||||
|
||||
drop view if exists history.match_drugs_to_trials;
|
||||
DROP TABLE IF EXISTS history.trial_snapshots;
|
||||
|
||||
CREATE TABLE IF NOT EXISTS history.trial_snapshots
|
||||
(
|
||||
nct_id character varying(15) COLLATE pg_catalog."default" NOT NULL,
|
||||
version integer NOT NULL,
|
||||
submission_date timestamp without time zone,
|
||||
primary_completion_date timestamp without time zone,
|
||||
primary_completion_date_category history.updatable_catetories,
|
||||
start_date timestamp without time zone,
|
||||
start_date_category history.updatable_catetories,
|
||||
completion_date timestamp without time zone,
|
||||
completion_date_category history.updatable_catetories,
|
||||
overall_status history.study_statuses,
|
||||
enrollment integer,
|
||||
enrollment_category history.updatable_catetories,
|
||||
sponsor character varying COLLATE pg_catalog."default",
|
||||
responsible_party character varying COLLATE pg_catalog."default",
|
||||
CONSTRAINT trial_snapshots_pkey PRIMARY KEY (nct_id, version)
|
||||
);
|
||||
|
||||
|
||||
ALTER TABLE IF EXISTS history.trial_snapshots
|
||||
OWNER to root;
|
||||
|
||||
|
||||
CREATE OR REPLACE VIEW history.match_drugs_to_trials
|
||||
AS SELECT bi.nct_id,
|
||||
rp.rxcui,
|
||||
rp.propvalue1
|
||||
FROM ctgov.browse_interventions bi
|
||||
JOIN rxnorm_migrated.rxnorm_props rp ON bi.downcase_mesh_term::text = rp.propvalue1::text
|
||||
WHERE rp.propname::text = 'RxNorm Name'::text AND (bi.nct_id::text IN ( SELECT trial_snapshots.nct_id
|
||||
FROM history.trial_snapshots));
|
||||
|
||||
|
||||
CREATE OR REPLACE VIEW public.match_trials_to_bn_in
|
||||
AS WITH trialncts AS (
|
||||
SELECT DISTINCT ts.nct_id
|
||||
FROM history.trial_snapshots ts
|
||||
)
|
||||
SELECT bi.nct_id,
|
||||
bi.downcase_mesh_term,
|
||||
rr.tty2,
|
||||
rr.rxcui2 AS bn_or_in_cui,
|
||||
count(*) AS count
|
||||
FROM ctgov.browse_interventions bi
|
||||
LEFT JOIN rxnorm_migrated.rxnorm_props rp ON bi.downcase_mesh_term::text = rp.propvalue1::text
|
||||
LEFT JOIN rxnorm_migrated.rxnorm_relations rr ON rr.rxcui1 = rp.rxcui
|
||||
WHERE (bi.nct_id::text IN ( SELECT trialncts.nct_id
|
||||
FROM trialncts)) AND bi.mesh_type::text = 'mesh-list'::text AND rp.propname::text = 'Active_ingredient_name'::text AND (rr.tty2 = ANY (ARRAY['BN'::bpchar, 'IN'::bpchar, 'MIN'::bpchar]))
|
||||
GROUP BY bi.nct_id, bi.downcase_mesh_term, rr.tty2, rr.rxcui2
|
||||
ORDER BY bi.nct_id;
|
||||
|
||||
|
||||
CREATE OR REPLACE VIEW public.match_trial_to_ndc11
|
||||
AS SELECT mttbi.nct_id,
|
||||
ah.ndc,
|
||||
count(*) AS count
|
||||
FROM match_trials_to_bn_in mttbi
|
||||
LEFT JOIN rxnorm_migrated.rxnorm_relations rr ON mttbi.bn_or_in_cui = rr.rxcui1
|
||||
LEFT JOIN rxnorm_migrated."ALLNDC_HISTORY" ah ON rr.rxcui2 = ah.rxcui
|
||||
WHERE rr.tty1 = 'BN'::bpchar AND (rr.tty2 = ANY (ARRAY['SBD'::bpchar, 'BPCK'::bpchar])) AND ah.sab::text = 'RXNORM'::text
|
||||
GROUP BY mttbi.nct_id, ah.ndc
|
||||
ORDER BY mttbi.nct_id, ah.ndc;
|
||||
|
||||
|
||||
CREATE OR REPLACE VIEW public.match_trial_to_marketing_start_date
|
||||
AS SELECT mttn.nct_id,
|
||||
n.application_number_or_citation,
|
||||
min(n.marketing_start_date) AS min
|
||||
FROM match_trial_to_ndc11 mttn
|
||||
JOIN spl.nsde n ON mttn.ndc = n.package_ndc11::bpchar
|
||||
WHERE n.product_type::text = 'HUMAN PRESCRIPTION DRUG'::text AND (n.marketing_category::text = ANY (ARRAY['NDA'::character varying, 'ANDA'::character varying, 'BLA'::character varying, 'NDA authorized generic'::character varying, 'NDA AUTHORIZED GENERIC'::character varying]::text[]))
|
||||
GROUP BY mttn.nct_id, n.application_number_or_citation
|
||||
ORDER BY mttn.nct_id;
|
||||
|
||||
Binary file not shown.
@ -0,0 +1 @@
|
||||
https://doi.org/10.6069/GHCW-8955
|
||||
@ -0,0 +1 @@
|
||||
,dad,home-pc,03.04.2023 15:13,file:///home/dad/.config/libreoffice/4;
|
||||
Binary file not shown.
Binary file not shown.
@ -0,0 +1,365 @@
|
||||
Cause ID,Cause Name,Parent ID,Parent Name,Level,Cause Outline,Sort Order,YLL Only,YLD Only
|
||||
294,All causes,294,All causes,0,Total,1,,
|
||||
295,"Communicable, maternal, neonatal, and nutritional diseases",294,All causes,1,A,2,,
|
||||
955,HIV/AIDS and sexually transmitted infections,295,"Communicable, maternal, neonatal, and nutritional diseases",2,A.1,3,,
|
||||
298,HIV/AIDS,955,HIV/AIDS and sexually transmitted infections,3,A.1.1,4,,
|
||||
948,HIV/AIDS - Drug-susceptible Tuberculosis,298,HIV/AIDS,4,A.1.1.1,5,,
|
||||
949,HIV/AIDS - Multidrug-resistant Tuberculosis without extensive drug resistance,298,HIV/AIDS,4,A.1.1.2,6,,
|
||||
950,HIV/AIDS - Extensively drug-resistant Tuberculosis,298,HIV/AIDS,4,A.1.1.3,7,,
|
||||
300,HIV/AIDS resulting in other diseases,298,HIV/AIDS,4,A.1.1.4,8,,
|
||||
393,Sexually transmitted infections excluding HIV,955,HIV/AIDS and sexually transmitted infections,3,A.1.2,9,,
|
||||
394,Syphilis,393,Sexually transmitted infections excluding HIV,4,A.1.2.1,10,,
|
||||
395,Chlamydial infection,393,Sexually transmitted infections excluding HIV,4,A.1.2.2,11,,
|
||||
396,Gonococcal infection,393,Sexually transmitted infections excluding HIV,4,A.1.2.3,12,,
|
||||
397,Trichomoniasis,393,Sexually transmitted infections excluding HIV,4,A.1.2.4,13,,X
|
||||
398,Genital herpes,393,Sexually transmitted infections excluding HIV,4,A.1.2.5,14,,X
|
||||
399,Other sexually transmitted infections,393,Sexually transmitted infections excluding HIV,4,A.1.2.6,15,,
|
||||
956,Respiratory infections and tuberculosis,295,"Communicable, maternal, neonatal, and nutritional diseases",2,A.2,16,,
|
||||
297,Tuberculosis,956,Respiratory infections and tuberculosis,3,A.2.1,17,,
|
||||
954,Latent tuberculosis infection,297,Tuberculosis,4,A.2.1.1,18,,X
|
||||
934,Drug-susceptible tuberculosis,297,Tuberculosis,4,A.2.1.2,19,,
|
||||
946,Multidrug-resistant tuberculosis without extensive drug resistance,297,Tuberculosis,4,A.2.1.3,20,,
|
||||
947,Extensively drug-resistant tuberculosis,297,Tuberculosis,4,A.2.1.4,21,,
|
||||
322,Lower respiratory infections,956,Respiratory infections and tuberculosis,3,A.2.2,22,,
|
||||
328,Upper respiratory infections,956,Respiratory infections and tuberculosis,3,A.2.3,23,,
|
||||
329,Otitis media,956,Respiratory infections and tuberculosis,3,A.2.4,24,,
|
||||
957,Enteric infections,295,"Communicable, maternal, neonatal, and nutritional diseases",2,A.3,25,,
|
||||
302,Diarrheal diseases,957,Enteric infections,3,A.3.1,26,,
|
||||
958,Typhoid and paratyphoid,957,Enteric infections,3,A.3.2,27,,
|
||||
319,Typhoid fever,958,Typhoid and paratyphoid,4,A.3.2.1,28,,
|
||||
320,Paratyphoid fever,958,Typhoid and paratyphoid,4,A.3.2.2,29,,
|
||||
959,Invasive Non-typhoidal Salmonella (iNTS),957,Enteric infections,3,A.3.3,30,,
|
||||
321,Other intestinal infectious diseases,957,Enteric infections,3,A.3.4,31,,
|
||||
344,Neglected tropical diseases and malaria,295,"Communicable, maternal, neonatal, and nutritional diseases",2,A.4,32,,
|
||||
345,Malaria,344,Neglected tropical diseases and malaria,3,A.4.1,33,,
|
||||
346,Chagas disease,344,Neglected tropical diseases and malaria,3,A.4.2,34,,
|
||||
347,Leishmaniasis,344,Neglected tropical diseases and malaria,3,A.4.3,35,,
|
||||
348,Visceral leishmaniasis,347,Leishmaniasis,4,A.4.3.1,36,,
|
||||
349,Cutaneous and mucocutaneous leishmaniasis,347,Leishmaniasis,4,A.4.3.2,37,,X
|
||||
350,African trypanosomiasis,344,Neglected tropical diseases and malaria,3,A.4.4,38,,
|
||||
351,Schistosomiasis,344,Neglected tropical diseases and malaria,3,A.4.5,39,,
|
||||
352,Cysticercosis,344,Neglected tropical diseases and malaria,3,A.4.6,40,,
|
||||
353,Cystic echinococcosis,344,Neglected tropical diseases and malaria,3,A.4.7,41,,
|
||||
354,Lymphatic filariasis,344,Neglected tropical diseases and malaria,3,A.4.8,42,,X
|
||||
355,Onchocerciasis,344,Neglected tropical diseases and malaria,3,A.4.9,43,,X
|
||||
356,Trachoma,344,Neglected tropical diseases and malaria,3,A.4.10,44,,X
|
||||
357,Dengue,344,Neglected tropical diseases and malaria,3,A.4.11,45,,
|
||||
358,Yellow fever,344,Neglected tropical diseases and malaria,3,A.4.12,46,,
|
||||
359,Rabies,344,Neglected tropical diseases and malaria,3,A.4.13,47,,
|
||||
360,Intestinal nematode infections,344,Neglected tropical diseases and malaria,3,A.4.14,48,,
|
||||
361,Ascariasis,360,Intestinal nematode infections,4,A.4.14.1,49,,
|
||||
362,Trichuriasis,360,Intestinal nematode infections,4,A.4.14.2,50,,X
|
||||
363,Hookworm disease,360,Intestinal nematode infections,4,A.4.14.3,51,,X
|
||||
364,Food-borne trematodiases,344,Neglected tropical diseases and malaria,3,A.4.15,52,,X
|
||||
405,Leprosy,344,Neglected tropical diseases and malaria,3,A.4.16,53,,X
|
||||
843,Ebola,344,Neglected tropical diseases and malaria,3,A.4.17,54,,
|
||||
935,Zika virus,344,Neglected tropical diseases and malaria,3,A.4.18,55,,
|
||||
936,Guinea worm disease,344,Neglected tropical diseases and malaria,3,A.4.19,56,,X
|
||||
365,Other neglected tropical diseases,344,Neglected tropical diseases and malaria,3,A.4.20,57,,
|
||||
961,Other infectious diseases,295,"Communicable, maternal, neonatal, and nutritional diseases",2,A.5,58,,
|
||||
332,Meningitis,961,Other infectious diseases,3,A.5.1,59,,
|
||||
337,Encephalitis,961,Other infectious diseases,3,A.5.2,60,,
|
||||
338,Diphtheria,961,Other infectious diseases,3,A.5.3,61,,
|
||||
339,Whooping cough,961,Other infectious diseases,3,A.5.4,62,,
|
||||
340,Tetanus,961,Other infectious diseases,3,A.5.5,63,,
|
||||
341,Measles,961,Other infectious diseases,3,A.5.6,64,,
|
||||
342,Varicella and herpes zoster,961,Other infectious diseases,3,A.5.7,65,,
|
||||
400,Acute hepatitis,961,Other infectious diseases,3,A.5.8,66,,
|
||||
401,Acute hepatitis A,400,Acute hepatitis,4,A.5.8.1,67,,
|
||||
402,Acute hepatitis B,400,Acute hepatitis,4,A.5.8.2,68,,
|
||||
403,Acute hepatitis C,400,Acute hepatitis,4,A.5.8.3,69,,
|
||||
404,Acute hepatitis E,400,Acute hepatitis,4,A.5.8.4,70,,
|
||||
408,Other unspecified infectious diseases,961,Other infectious diseases,3,A.5.9,71,,
|
||||
962,Maternal and neonatal disorders,295,"Communicable, maternal, neonatal, and nutritional diseases",2,A.6,72,,
|
||||
366,Maternal disorders,962,Maternal and neonatal disorders,3,A.6.1,73,,
|
||||
367,Maternal hemorrhage,366,Maternal disorders,4,A.6.1.1,74,,
|
||||
368,Maternal sepsis and other maternal infections,366,Maternal disorders,4,A.6.1.2,75,,
|
||||
369,Maternal hypertensive disorders,366,Maternal disorders,4,A.6.1.3,76,,
|
||||
370,Maternal obstructed labor and uterine rupture,366,Maternal disorders,4,A.6.1.4,77,,
|
||||
995,Maternal abortion and miscarriage,366,Maternal disorders,4,A.6.1.5,78,,
|
||||
374,Ectopic pregnancy,366,Maternal disorders,4,A.6.1.6,79,,
|
||||
375,Indirect maternal deaths,366,Maternal disorders,4,A.6.1.7,80,X,
|
||||
376,Late maternal deaths,366,Maternal disorders,4,A.6.1.8,81,X,
|
||||
741,Maternal deaths aggravated by HIV/AIDS,366,Maternal disorders,4,A.6.1.9,82,X,
|
||||
379,Other maternal disorders,366,Maternal disorders,4,A.6.1.10,83,,
|
||||
380,Neonatal disorders,962,Maternal and neonatal disorders,3,A.6.2,84,,
|
||||
381,Neonatal preterm birth,380,Neonatal disorders,4,A.6.2.1,85,,
|
||||
382,Neonatal encephalopathy due to birth asphyxia and trauma,380,Neonatal disorders,4,A.6.2.2,86,,
|
||||
383,Neonatal sepsis and other neonatal infections,380,Neonatal disorders,4,A.6.2.3,87,,
|
||||
384,Hemolytic disease and other neonatal jaundice,380,Neonatal disorders,4,A.6.2.4,88,,
|
||||
385,Other neonatal disorders,380,Neonatal disorders,4,A.6.2.5,89,,
|
||||
386,Nutritional deficiencies,295,"Communicable, maternal, neonatal, and nutritional diseases",2,A.7,90,,
|
||||
387,Protein-energy malnutrition,386,Nutritional deficiencies,3,A.7.1,91,,
|
||||
388,Iodine deficiency,386,Nutritional deficiencies,3,A.7.2,92,,X
|
||||
389,Vitamin A deficiency,386,Nutritional deficiencies,3,A.7.3,93,,X
|
||||
390,Dietary iron deficiency,386,Nutritional deficiencies,3,A.7.4,94,,X
|
||||
391,Other nutritional deficiencies,386,Nutritional deficiencies,3,A.7.5,95,,
|
||||
409,Non-communicable diseases,294,All causes,1,B,96,,
|
||||
410,Neoplasms,409,Non-communicable diseases,2,B.1,97,,
|
||||
444,Lip and oral cavity cancer,410,Neoplasms,3,B.1.1,98,,
|
||||
447,Nasopharynx cancer,410,Neoplasms,3,B.1.2,99,,
|
||||
450,Other pharynx cancer,410,Neoplasms,3,B.1.3,100,,
|
||||
411,Esophageal cancer,410,Neoplasms,3,B.1.4,101,,
|
||||
414,Stomach cancer,410,Neoplasms,3,B.1.5,102,,
|
||||
441,Colon and rectum cancer,410,Neoplasms,3,B.1.6,103,,
|
||||
417,Liver cancer,410,Neoplasms,3,B.1.7,104,,
|
||||
418,Liver cancer due to hepatitis B,417,Liver cancer,4,B.1.7.1,105,,
|
||||
419,Liver cancer due to hepatitis C,417,Liver cancer,4,B.1.7.2,106,,
|
||||
420,Liver cancer due to alcohol use,417,Liver cancer,4,B.1.7.3,107,,
|
||||
996,Liver cancer due to NASH,417,Liver cancer,4,B.1.7.4,108,,
|
||||
1021,Liver cancer due to other causes,417,Liver cancer,4,B.1.7.5,109,,
|
||||
453,Gallbladder and biliary tract cancer,410,Neoplasms,3,B.1.8,110,,
|
||||
456,Pancreatic cancer,410,Neoplasms,3,B.1.9,111,,
|
||||
423,Larynx cancer,410,Neoplasms,3,B.1.10,112,,
|
||||
426,"Tracheal, bronchus, and lung cancer",410,Neoplasms,3,B.1.11,113,,
|
||||
459,Malignant skin melanoma,410,Neoplasms,3,B.1.12,114,,
|
||||
462,Non-melanoma skin cancer,410,Neoplasms,3,B.1.13,115,,
|
||||
849,Non-melanoma skin cancer (squamous-cell carcinoma),462,Non-melanoma skin cancer,4,B.1.13.1,116,,
|
||||
850,Non-melanoma skin cancer (basal-cell carcinoma),462,Non-melanoma skin cancer,4,B.1.13.2,117,,X
|
||||
429,Breast cancer,410,Neoplasms,3,B.1.14,118,,
|
||||
432,Cervical cancer,410,Neoplasms,3,B.1.15,119,,
|
||||
435,Uterine cancer,410,Neoplasms,3,B.1.16,120,,
|
||||
465,Ovarian cancer,410,Neoplasms,3,B.1.17,121,,
|
||||
438,Prostate cancer,410,Neoplasms,3,B.1.18,122,,
|
||||
468,Testicular cancer,410,Neoplasms,3,B.1.19,123,,
|
||||
471,Kidney cancer,410,Neoplasms,3,B.1.20,124,,
|
||||
474,Bladder cancer,410,Neoplasms,3,B.1.21,125,,
|
||||
477,Brain and central nervous system cancer,410,Neoplasms,3,B.1.22,126,,
|
||||
480,Thyroid cancer,410,Neoplasms,3,B.1.23,127,,
|
||||
483,Mesothelioma,410,Neoplasms,3,B.1.24,128,,
|
||||
484,Hodgkin lymphoma,410,Neoplasms,3,B.1.25,129,,
|
||||
485,Non-Hodgkin lymphoma,410,Neoplasms,3,B.1.26,130,,
|
||||
486,Multiple myeloma,410,Neoplasms,3,B.1.27,131,,
|
||||
487,Leukemia,410,Neoplasms,3,B.1.28,132,,
|
||||
845,Acute lymphoid leukemia,487,Leukemia,4,B.1.28.1,133,,
|
||||
846,Chronic lymphoid leukemia,487,Leukemia,4,B.1.28.2,134,,
|
||||
847,Acute myeloid leukemia,487,Leukemia,4,B.1.28.3,135,,
|
||||
848,Chronic myeloid leukemia,487,Leukemia,4,B.1.28.4,136,,
|
||||
943,Other leukemia,487,Leukemia,4,B.1.28.5,137,,
|
||||
1022,Other malignant neoplasms,410,Neoplasms,3,B.1.29,138,,
|
||||
490,Other neoplasms,410,Neoplasms,3,B.1.30,139,,
|
||||
964,"Myelodysplastic, myeloproliferative, and other hematopoietic neoplasms",490,Other neoplasms,4,B.1.30.1,140,,
|
||||
965,Benign and in situ intestinal neoplasms,490,Other neoplasms,4,B.1.30.2,141,,X
|
||||
966,Benign and in situ cervical and uterine neoplasms,490,Other neoplasms,4,B.1.30.3,142,,X
|
||||
967,Other benign and in situ neoplasms,490,Other neoplasms,4,B.1.30.4,143,,X
|
||||
491,Cardiovascular diseases,409,Non-communicable diseases,2,B.2,144,,
|
||||
492,Rheumatic heart disease,491,Cardiovascular diseases,3,B.2.1,145,,
|
||||
493,Ischemic heart disease,491,Cardiovascular diseases,3,B.2.2,146,,
|
||||
494,Stroke,491,Cardiovascular diseases,3,B.2.3,147,,
|
||||
495,Ischemic stroke,494,Stroke,4,B.2.3.1,148,,
|
||||
496,Intracerebral hemorrhage,494,Stroke,4,B.2.3.2,149,,
|
||||
497,Subarachnoid hemorrhage,494,Stroke,4,B.2.3.3,150,,
|
||||
498,Hypertensive heart disease,491,Cardiovascular diseases,3,B.2.4,151,,
|
||||
504,Non-rheumatic valvular heart disease,491,Cardiovascular diseases,3,B.2.5,152,,
|
||||
968,Non-rheumatic calcific aortic valve disease,504,Non-rheumatic valvular heart disease,4,B.2.5.1,153,,
|
||||
969,Non-rheumatic degenerative mitral valve disease,504,Non-rheumatic valvular heart disease,4,B.2.5.2,154,,
|
||||
970,Other non-rheumatic valve diseases,504,Non-rheumatic valvular heart disease,4,B.2.5.3,155,,
|
||||
499,Cardiomyopathy and myocarditis,491,Cardiovascular diseases,3,B.2.6,156,,
|
||||
942,Myocarditis,499,Cardiomyopathy and myocarditis,4,B.2.6.1,157,,
|
||||
938,Alcoholic cardiomyopathy,499,Cardiomyopathy and myocarditis,4,B.2.6.2,158,,
|
||||
944,Other cardiomyopathy,499,Cardiomyopathy and myocarditis,4,B.2.6.3,159,,
|
||||
500,Atrial fibrillation and flutter,491,Cardiovascular diseases,3,B.2.8,160,,
|
||||
501,Aortic aneurysm,491,Cardiovascular diseases,3,B.2.9,161,X,
|
||||
502,Peripheral artery disease,491,Cardiovascular diseases,3,B.2.10,162,,
|
||||
503,Endocarditis,491,Cardiovascular diseases,3,B.2.11,163,,
|
||||
1023,Other cardiovascular and circulatory diseases,491,Cardiovascular diseases,3,B.2.12,164,,
|
||||
508,Chronic respiratory diseases,409,Non-communicable diseases,2,B.3,165,,
|
||||
509,Chronic obstructive pulmonary disease,508,Chronic respiratory diseases,3,B.3.1,166,,
|
||||
510,Pneumoconiosis,508,Chronic respiratory diseases,3,B.3.2,167,,
|
||||
511,Silicosis,510,Pneumoconiosis,4,B.3.2.1,168,,
|
||||
512,Asbestosis,510,Pneumoconiosis,4,B.3.2.2,169,,
|
||||
513,Coal workers pneumoconiosis,510,Pneumoconiosis,4,B.3.2.3,170,,
|
||||
514,Other pneumoconiosis,510,Pneumoconiosis,4,B.3.2.4,171,,
|
||||
515,Asthma,508,Chronic respiratory diseases,3,B.3.3,172,,
|
||||
516,Interstitial lung disease and pulmonary sarcoidosis,508,Chronic respiratory diseases,3,B.3.4,173,,
|
||||
520,Other chronic respiratory diseases,508,Chronic respiratory diseases,3,B.3.5,174,,
|
||||
526,Digestive diseases,409,Non-communicable diseases,2,B.4,175,,
|
||||
521,Cirrhosis and other chronic liver diseases,526,Digestive diseases,3,B.4.1,176,,
|
||||
522,Cirrhosis and other chronic liver diseases due to hepatitis B,521,Cirrhosis and other chronic liver diseases,4,B.4.1.1,177,,
|
||||
523,Cirrhosis and other chronic liver diseases due to hepatitis C,521,Cirrhosis and other chronic liver diseases,4,B.4.1.2,178,,
|
||||
524,Cirrhosis and other chronic liver diseases due to alcohol use,521,Cirrhosis and other chronic liver diseases,4,B.4.1.3,179,,
|
||||
971,Cirrhosis and other chronic liver diseases due to NAFLD,521,Cirrhosis and other chronic liver diseases,4,B.4.1.4,180,,
|
||||
525,Cirrhosis and other chronic liver diseases due to other causes,521,Cirrhosis and other chronic liver diseases,4,B.4.1.5,181,,
|
||||
992,Upper digestive system diseases,526,Digestive diseases,3,B.4.2,182,,
|
||||
527,Peptic ulcer disease,992,Upper digestive system diseases,4,B.4.2.1,183,,
|
||||
528,Gastritis and duodenitis,992,Upper digestive system diseases,4,B.4.2.2,184,,
|
||||
536,Gastroesophageal reflux disease,992,Upper digestive system diseases,4,B.4.2.3,185,,X
|
||||
529,Appendicitis,526,Digestive diseases,3,B.4.3,186,,
|
||||
530,Paralytic ileus and intestinal obstruction,526,Digestive diseases,3,B.4.4,187,,
|
||||
531,"Inguinal, femoral, and abdominal hernia",526,Digestive diseases,3,B.4.5,188,,
|
||||
532,Inflammatory bowel disease,526,Digestive diseases,3,B.4.6,189,,
|
||||
533,Vascular intestinal disorders,526,Digestive diseases,3,B.4.7,190,,
|
||||
534,Gallbladder and biliary diseases,526,Digestive diseases,3,B.4.8,191,,
|
||||
535,Pancreatitis,526,Digestive diseases,3,B.4.9,192,,
|
||||
541,Other digestive diseases,526,Digestive diseases,3,B.4.10,193,,
|
||||
542,Neurological disorders,409,Non-communicable diseases,2,B.5,194,,
|
||||
543,Alzheimer's disease and other dementias,542,Neurological disorders,3,B.5.1,195,,
|
||||
544,Parkinson's disease,542,Neurological disorders,3,B.5.2,196,,
|
||||
545,Idiopathic epilepsy,542,Neurological disorders,3,B.5.3,197,,
|
||||
546,Multiple sclerosis,542,Neurological disorders,3,B.5.4,198,,
|
||||
554,Motor neuron disease,542,Neurological disorders,3,B.5.5,199,,
|
||||
972,Headache disorders,542,Neurological disorders,3,B.5.6,200,,X
|
||||
547,Migraine,972,Headache disorders,4,B.5.6.1,201,,X
|
||||
548,Tension-type headache,972,Headache disorders,4,B.5.6.2,202,,X
|
||||
557,Other neurological disorders,542,Neurological disorders,3,B.5.7,203,,
|
||||
558,Mental disorders,409,Non-communicable diseases,2,B.6,204,,
|
||||
559,Schizophrenia,558,Mental disorders,3,B.6.1,205,,X
|
||||
567,Depressive disorders,558,Mental disorders,3,B.6.2,206,,X
|
||||
568,Major depressive disorder,567,Depressive disorders,4,B.6.2.1,207,,X
|
||||
569,Dysthymia,567,Depressive disorders,4,B.6.2.2,208,,X
|
||||
570,Bipolar disorder,558,Mental disorders,3,B.6.3,209,,X
|
||||
571,Anxiety disorders,558,Mental disorders,3,B.6.4,210,,X
|
||||
572,Eating disorders,558,Mental disorders,3,B.6.5,211,,
|
||||
573,Anorexia nervosa,572,Eating disorders,4,B.6.5.1,212,,
|
||||
574,Bulimia nervosa,572,Eating disorders,4,B.6.5.2,213,,
|
||||
575,Autism spectrum disorders,558,Mental disorders,3,B.6.6,214,,X
|
||||
578,Attention-deficit/hyperactivity disorder,558,Mental disorders,3,B.6.7,215,,X
|
||||
579,Conduct disorder,558,Mental disorders,3,B.6.8,216,,X
|
||||
582,Idiopathic developmental intellectual disability,558,Mental disorders,3,B.6.9,217,,X
|
||||
585,Other mental disorders,558,Mental disorders,3,B.6.10,218,,X
|
||||
973,Substance use disorders,409,Non-communicable diseases,2,B.7,219,,
|
||||
560,Alcohol use disorders,973,Substance use disorders,3,B.7.1,220,,
|
||||
561,Drug use disorders,973,Substance use disorders,3,B.7.2,221,,
|
||||
562,Opioid use disorders,561,Drug use disorders,4,B.7.2.1,222,,
|
||||
563,Cocaine use disorders,561,Drug use disorders,4,B.7.2.2,223,,
|
||||
564,Amphetamine use disorders,561,Drug use disorders,4,B.7.2.3,224,,
|
||||
565,Cannabis use disorders,561,Drug use disorders,4,B.7.2.4,225,,X
|
||||
566,Other drug use disorders,561,Drug use disorders,4,B.7.2.5,226,,
|
||||
974,Diabetes and kidney diseases,409,Non-communicable diseases,2,B.8,227,,
|
||||
587,Diabetes mellitus,974,Diabetes and kidney diseases,3,B.8.1,228,,
|
||||
975,Diabetes mellitus type 1,587,Diabetes mellitus,4,B.8.1.1,229,,
|
||||
976,Diabetes mellitus type 2,587,Diabetes mellitus,4,B.8.1.2,230,,
|
||||
589,Chronic kidney disease,974,Diabetes and kidney diseases,3,B.8.2,231,,
|
||||
997,Chronic kidney disease due to diabetes mellitus type 1,589,Chronic kidney disease,4,B.8.2.1,232,,
|
||||
998,Chronic kidney disease due to diabetes mellitus type 2,589,Chronic kidney disease,4,B.8.2.2,233,,
|
||||
591,Chronic kidney disease due to hypertension,589,Chronic kidney disease,4,B.8.2.3,234,,
|
||||
592,Chronic kidney disease due to glomerulonephritis,589,Chronic kidney disease,4,B.8.2.4,235,,
|
||||
593,Chronic kidney disease due to other and unspecified causes,589,Chronic kidney disease,4,B.8.2.5,236,,
|
||||
588,Acute glomerulonephritis,974,Diabetes and kidney diseases,3,B.8.3,237,,
|
||||
653,Skin and subcutaneous diseases,409,Non-communicable diseases,2,B.9,238,,
|
||||
654,Dermatitis,653,Skin and subcutaneous diseases,3,B.9.1,239,,X
|
||||
977,Atopic dermatitis,654,Dermatitis,4,B.9.1.1,240,,X
|
||||
978,Contact dermatitis,654,Dermatitis,4,B.9.1.2,241,,X
|
||||
979,Seborrhoeic dermatitis,654,Dermatitis,4,B.9.1.3,242,,X
|
||||
655,Psoriasis,653,Skin and subcutaneous diseases,3,B.9.2,243,,X
|
||||
980,Bacterial skin diseases,653,Skin and subcutaneous diseases,3,B.9.3,244,,
|
||||
656,Cellulitis,980,Bacterial skin diseases,4,B.9.3.1,245,,
|
||||
657,Pyoderma,980,Bacterial skin diseases,4,B.9.3.2,246,,
|
||||
658,Scabies,653,Skin and subcutaneous diseases,3,B.9.4,247,,X
|
||||
659,Fungal skin diseases,653,Skin and subcutaneous diseases,3,B.9.5,248,,X
|
||||
660,Viral skin diseases,653,Skin and subcutaneous diseases,3,B.9.6,249,,X
|
||||
661,Acne vulgaris,653,Skin and subcutaneous diseases,3,B.9.7,250,,X
|
||||
662,Alopecia areata,653,Skin and subcutaneous diseases,3,B.9.8,251,,X
|
||||
663,Pruritus,653,Skin and subcutaneous diseases,3,B.9.9,252,,X
|
||||
664,Urticaria,653,Skin and subcutaneous diseases,3,B.9.10,253,,X
|
||||
665,Decubitus ulcer,653,Skin and subcutaneous diseases,3,B.9.11,254,,
|
||||
668,Other skin and subcutaneous diseases,653,Skin and subcutaneous diseases,3,B.9.12,255,,
|
||||
669,Sense organ diseases,409,Non-communicable diseases,2,B.10,256,,X
|
||||
981,Blindness and vision loss,669,Sense organ diseases,3,B.10.1,257,,X
|
||||
670,Glaucoma,981,Blindness and vision loss,4,B.10.1.1,258,,X
|
||||
671,Cataract,981,Blindness and vision loss,4,B.10.1.2,259,,X
|
||||
672,Age-related macular degeneration,981,Blindness and vision loss,4,B.10.1.3,260,,X
|
||||
999,Refraction disorders,981,Blindness and vision loss,4,B.10.1.4,261,,X
|
||||
1000,Near vision loss,981,Blindness and vision loss,4,B.10.1.5,262,,X
|
||||
675,Other vision loss,981,Blindness and vision loss,4,B.10.1.6,263,,X
|
||||
674,Age-related and other hearing loss,669,Sense organ diseases,3,B.10.2,264,,X
|
||||
679,Other sense organ diseases,669,Sense organ diseases,3,B.10.3,265,,X
|
||||
626,Musculoskeletal disorders,409,Non-communicable diseases,2,B.11,266,,
|
||||
627,Rheumatoid arthritis,626,Musculoskeletal disorders,3,B.11.1,267,,
|
||||
628,Osteoarthritis,626,Musculoskeletal disorders,3,B.11.2,268,,X
|
||||
1014,Osteoarthritis hip,628,Osteoarthritis,4,B.11.2.1,269,,X
|
||||
1015,Osteoarthritis knee,628,Osteoarthritis,4,B.11.2.2,270,,X
|
||||
1016,Osteoarthritis hand,628,Osteoarthritis,4,B.11.2.3,271,,X
|
||||
1017,Osteoarthritis other,628,Osteoarthritis,4,B.11.2.4,272,,X
|
||||
630,Low back pain,626,Musculoskeletal disorders,3,B.11.3,273,,X
|
||||
631,Neck pain,626,Musculoskeletal disorders,3,B.11.4,274,,X
|
||||
632,Gout,626,Musculoskeletal disorders,3,B.11.5,275,,X
|
||||
639,Other musculoskeletal disorders,626,Musculoskeletal disorders,3,B.11.6,276,,
|
||||
640,Other non-communicable diseases,409,Non-communicable diseases,2,B.12,277,,
|
||||
641,Congenital birth defects,640,Other non-communicable diseases,3,B.12.1,278,,
|
||||
642,Neural tube defects,641,Congenital birth defects,4,B.12.1.1,279,,
|
||||
643,Congenital heart anomalies,641,Congenital birth defects,4,B.12.1.2,280,,
|
||||
644,Orofacial clefts,641,Congenital birth defects,4,B.12.1.3,281,,
|
||||
645,Down syndrome,641,Congenital birth defects,4,B.12.1.4,282,,
|
||||
646,Turner syndrome,641,Congenital birth defects,4,B.12.1.5,283,,X
|
||||
647,Klinefelter syndrome,641,Congenital birth defects,4,B.12.1.6,284,,X
|
||||
648,Other chromosomal abnormalities,641,Congenital birth defects,4,B.12.1.7,285,,
|
||||
649,Congenital musculoskeletal and limb anomalies,641,Congenital birth defects,4,B.12.1.8,286,,
|
||||
650,Urogenital congenital anomalies,641,Congenital birth defects,4,B.12.1.9,287,,
|
||||
651,Digestive congenital anomalies,641,Congenital birth defects,4,B.12.1.10,288,,
|
||||
652,Other congenital birth defects,641,Congenital birth defects,4,B.12.1.11,289,,
|
||||
594,Urinary diseases and male infertility,640,Other non-communicable diseases,3,B.12.2,290,,
|
||||
595,Urinary tract infections and interstitial nephritis,594,Urinary diseases and male infertility,4,B.12.2.1,291,,
|
||||
596,Urolithiasis,594,Urinary diseases and male infertility,4,B.12.2.2,292,,
|
||||
597,Benign prostatic hyperplasia,594,Urinary diseases and male infertility,4,B.12.2.3,293,,X
|
||||
598,Male infertility,594,Urinary diseases and male infertility,4,B.12.2.4,294,,X
|
||||
602,Other urinary diseases,594,Urinary diseases and male infertility,4,B.12.2.5,295,,
|
||||
603,Gynecological diseases,640,Other non-communicable diseases,3,B.12.3,296,,
|
||||
604,Uterine fibroids,603,Gynecological diseases,4,B.12.3.1,297,,
|
||||
605,Polycystic ovarian syndrome,603,Gynecological diseases,4,B.12.3.2,298,,X
|
||||
606,Female infertility,603,Gynecological diseases,4,B.12.3.3,299,,X
|
||||
607,Endometriosis,603,Gynecological diseases,4,B.12.3.4,300,,
|
||||
608,Genital prolapse,603,Gynecological diseases,4,B.12.3.5,301,,
|
||||
609,Premenstrual syndrome,603,Gynecological diseases,4,B.12.3.6,302,,X
|
||||
612,Other gynecological diseases,603,Gynecological diseases,4,B.12.3.7,303,,
|
||||
613,Hemoglobinopathies and hemolytic anemias,640,Other non-communicable diseases,3,B.12.4,304,,
|
||||
614,Thalassemias,613,Hemoglobinopathies and hemolytic anemias,4,B.12.4.1,305,,
|
||||
837,Thalassemias trait,613,Hemoglobinopathies and hemolytic anemias,4,B.12.4.2,306,,X
|
||||
615,Sickle cell disorders,613,Hemoglobinopathies and hemolytic anemias,4,B.12.4.3,307,,
|
||||
838,Sickle cell trait,613,Hemoglobinopathies and hemolytic anemias,4,B.12.4.4,308,,X
|
||||
616,G6PD deficiency,613,Hemoglobinopathies and hemolytic anemias,4,B.12.4.5,309,,
|
||||
839,G6PD trait,613,Hemoglobinopathies and hemolytic anemias,4,B.12.4.6,310,,X
|
||||
618,Other hemoglobinopathies and hemolytic anemias,613,Hemoglobinopathies and hemolytic anemias,4,B.12.4.7,311,,
|
||||
619,"Endocrine, metabolic, blood, and immune disorders",640,Other non-communicable diseases,3,B.12.5,312,,
|
||||
680,Oral disorders,640,Other non-communicable diseases,3,B.12.6,313,,X
|
||||
681,Caries of deciduous teeth,680,Oral disorders,4,B.12.6.1,314,,X
|
||||
682,Caries of permanent teeth,680,Oral disorders,4,B.12.6.2,315,,X
|
||||
683,Periodontal diseases,680,Oral disorders,4,B.12.6.3,316,,X
|
||||
684,Edentulism,680,Oral disorders,4,B.12.6.4,317,,X
|
||||
685,Other oral disorders,680,Oral disorders,4,B.12.6.5,318,,X
|
||||
686,Sudden infant death syndrome,640,Other non-communicable diseases,3,B.12.7,319,X,
|
||||
687,Injuries,294,All causes,1,C,320,,
|
||||
688,Transport injuries,687,Injuries,2,C.1,321,,
|
||||
689,Road injuries,688,Transport injuries,3,C.1.1,322,,
|
||||
690,Pedestrian road injuries,689,Road injuries,4,C.1.1.1,323,,
|
||||
691,Cyclist road injuries,689,Road injuries,4,C.1.1.2,324,,
|
||||
692,Motorcyclist road injuries,689,Road injuries,4,C.1.1.3,325,,
|
||||
693,Motor vehicle road injuries,689,Road injuries,4,C.1.1.4,326,,
|
||||
694,Other road injuries,689,Road injuries,4,C.1.1.5,327,,
|
||||
695,Other transport injuries,688,Transport injuries,3,C.1.2,328,,
|
||||
696,Unintentional injuries,687,Injuries,2,C.2,329,,
|
||||
697,Falls,696,Unintentional injuries,3,C.2.1,330,,
|
||||
698,Drowning,696,Unintentional injuries,3,C.2.2,331,,
|
||||
699,"Fire, heat, and hot substances",696,Unintentional injuries,3,C.2.3,332,,
|
||||
700,Poisonings,696,Unintentional injuries,3,C.2.4,333,,
|
||||
701,Poisoning by carbon monoxide,700,Poisonings,4,C.2.4.1,334,,
|
||||
703,Poisoning by other means,700,Poisonings,4,C.2.4.2,335,,
|
||||
704,Exposure to mechanical forces,696,Unintentional injuries,3,C.2.5,336,,
|
||||
705,Unintentional firearm injuries,704,Exposure to mechanical forces,4,C.2.5.1,337,,
|
||||
707,Other exposure to mechanical forces,704,Exposure to mechanical forces,4,C.2.5.2,338,,
|
||||
708,Adverse effects of medical treatment,696,Unintentional injuries,3,C.2.6,339,,
|
||||
709,Animal contact,696,Unintentional injuries,3,C.2.7,340,,
|
||||
710,Venomous animal contact,709,Animal contact,4,C.2.7.1,341,,
|
||||
711,Non-venomous animal contact,709,Animal contact,4,C.2.7.2,342,,
|
||||
712,Foreign body,696,Unintentional injuries,3,C.2.8,343,,
|
||||
713,Pulmonary aspiration and foreign body in airway,712,Foreign body,4,C.2.8.1,344,,
|
||||
714,Foreign body in eyes,712,Foreign body,4,C.2.8.2,345,,X
|
||||
715,Foreign body in other body part,712,Foreign body,4,C.2.8.3,346,,
|
||||
842,Environmental heat and cold exposure,696,Unintentional injuries,3,C.2.9,347,,
|
||||
729,Exposure to forces of nature,696,Unintentional injuries,3,C.2.10,348,,
|
||||
716,Other unintentional injuries,696,Unintentional injuries,3,C.2.11,349,,
|
||||
717,Self-harm and interpersonal violence,687,Injuries,2,C.3,350,,
|
||||
718,Self-harm,717,Self-harm and interpersonal violence,3,C.3.1,351,,
|
||||
721,Self-harm by firearm,718,Self-harm,4,C.3.1.1,352,,
|
||||
723,Self-harm by other specified means,718,Self-harm,4,C.3.1.2,353,,
|
||||
724,Interpersonal violence,717,Self-harm and interpersonal violence,3,C.3.2,354,,
|
||||
725,Physical violence by firearm,724,Interpersonal violence,4,C.3.2.1,355,,
|
||||
726,Physical violence by sharp object,724,Interpersonal violence,4,C.3.2.2,356,,
|
||||
941,Sexual violence,724,Interpersonal violence,4,C.3.2.3,357,,X
|
||||
727,Physical violence by other means,724,Interpersonal violence,4,C.3.2.4,358,,
|
||||
945,Conflict and terrorism,717,Self-harm and interpersonal violence,3,C.3.3,359,,
|
||||
854,Executions and police conflict,717,Self-harm and interpersonal violence,3,C.3.4,360,,
|
||||
1029,Total cancers,294,All causes,1,D,361,,
|
||||
1026,Total burden related to hepatitis B,294,All causes,1,E,362,,
|
||||
1027,Total burden related to hepatitis C,294,All causes,1,F,363,,
|
||||
1028,Total burden related to Non-alcoholic fatty liver disease (NAFLD),294,All causes,1,G,364,,
|
||||
|
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|
||||
https://doi.org/10.6069/Q0YC-CR46
|
||||
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|
||||
,dad,home-pc,06.04.2023 22:41,file:///home/dad/.config/libreoffice/4;
|
||||
@ -0,0 +1,248 @@
|
||||
"Level"|"Chapter"|"chapter_code"|"start_code"|"end_code"|"group_name"
|
||||
1|"I Certain infectious and parasitic diseases "|1|" A00 "|" B99 "|"I Certain infectious and parasitic diseases "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" A00 "|" A09 "|" Intestinal infectious diseases "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" A15 "|" A19 "|" Tuberculosis "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" A20 "|" A28 "|" Certain zoonotic bacterial diseases "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" A30 "|" A49 "|" Other bacterial diseases "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" A50 "|" A64 "|" Infections with a predominantly sexual mode of transmission "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" A65 "|" A69 "|" Other spirochaetal diseases "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" A70 "|" A74 "|" Other diseases caused by chlamydiae "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" A75 "|" A79 "|" Rickettsioses "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" A80 "|" A89 "|" Viral infections of the central nervous system "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" A92 "|" A99 "|" Arthropod-borne viral fevers and viral haemorrhagic fevers "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" B00 "|" B09 "|" Viral infections characterized by skin and mucous membrane lesions "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" B15 "|" B19 "|" Viral hepatitis "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" B20 "|" B24 "|" Human immunodeficiency virus [HIV] disease "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" B25 "|" B34 "|" Other viral diseases "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" B35 "|" B49 "|" Mycoses "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" B50 "|" B64 "|" Protozoal diseases "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" B65 "|" B83 "|" Helminthiases "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" B85 "|" B89 "|" Pediculosis, acariasis and other infestations "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" B90 "|" B94 "|" Sequelae of infectious and parasitic diseases "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" B95 "|" B98 "|" Bacterial, viral and other infectious agents "
|
||||
2|"I Certain infectious and parasitic diseases "|1|" B99 "|" B99 "|" Other infectious diseases "
|
||||
1|"II Neoplasms "|2|" C00 "|" D48 "|"II Neoplasms "
|
||||
2|"II Neoplasms "|2|" C00 "|" C14 "|" Malignant neoplasms of lip, oral cavity and pharynx "
|
||||
2|"II Neoplasms "|2|" C15 "|" C26 "|" Malignant neoplasms of digestive organs "
|
||||
2|"II Neoplasms "|2|" C30 "|" C39 "|" Malignant neoplasms of respiratory and intrathoracic organs "
|
||||
2|"II Neoplasms "|2|" C40 "|" C41 "|" Malignant neoplasms of bone and articular cartilage "
|
||||
2|"II Neoplasms "|2|" C43 "|" C44 "|" Melanoma and other malignant neoplasms of skin "
|
||||
2|"II Neoplasms "|2|" C45 "|" C49 "|" Malignant neoplasms of mesothelial and soft tissue "
|
||||
2|"II Neoplasms "|2|" C50 "|" C50 "|" Malignant neoplasm of breast "
|
||||
2|"II Neoplasms "|2|" C51 "|" C58 "|" Malignant neoplasms of female genital organs "
|
||||
2|"II Neoplasms "|2|" C60 "|" C63 "|" Malignant neoplasms of male genital organs "
|
||||
2|"II Neoplasms "|2|" C64 "|" C68 "|" Malignant neoplasms of urinary tract "
|
||||
2|"II Neoplasms "|2|" C69 "|" C72 "|" Malignant neoplasms of eye, brain and other parts of central nervous system "
|
||||
2|"II Neoplasms "|2|" C73 "|" C75 "|" Malignant neoplasms of thyroid and other endocrine glands "
|
||||
2|"II Neoplasms "|2|" C76 "|" C80 "|" Malignant neoplasms of ill-defined, secondary and unspecified sites "
|
||||
2|"II Neoplasms "|2|" C81 "|" C96 "|" Malignant neoplasms, stated or presumed to be primary, of lymphoid, haematopoietic and related tissue "
|
||||
2|"II Neoplasms "|2|" C97 "|" C97 "|" Malignant neoplasms of independent (primary) multiple sites "
|
||||
2|"II Neoplasms "|2|" D00 "|" D09 "|" In situ neoplasms "
|
||||
2|"II Neoplasms "|2|" D10 "|" D36 "|" Benign neoplasms "
|
||||
2|"II Neoplasms "|2|" D37 "|" D48 "|" Neoplasms of uncertain or unknown behaviour "
|
||||
1|"III Diseases of the blood and blood-forming organs and certain disorders involving the immune mechanism "|3|" D50 "|" D89 "|"III Diseases of the blood and blood-forming organs and certain disorders involving the immune mechanism "
|
||||
2|"III Diseases of the blood and blood-forming organs and certain disorders involving the immune mechanism "|3|" D50 "|" D53 "|" Nutritional anaemias "
|
||||
2|"III Diseases of the blood and blood-forming organs and certain disorders involving the immune mechanism "|3|" D55 "|" D59 "|" Haemolytic anaemias "
|
||||
2|"III Diseases of the blood and blood-forming organs and certain disorders involving the immune mechanism "|3|" D60 "|" D64 "|" Aplastic and other anaemias "
|
||||
2|"III Diseases of the blood and blood-forming organs and certain disorders involving the immune mechanism "|3|" D65 "|" D69 "|" Coagulation defects, purpura and other haemorrhagic conditions "
|
||||
2|"III Diseases of the blood and blood-forming organs and certain disorders involving the immune mechanism "|3|" D70 "|" D77 "|" Other diseases of blood and blood-forming organs "
|
||||
2|"III Diseases of the blood and blood-forming organs and certain disorders involving the immune mechanism "|3|" D80 "|" D89 "|" Certain disorders involving the immune mechanism "
|
||||
1|"IV Endocrine, nutritional and metabolic diseases "|4|" E00 "|" E90 "|"IV Endocrine, nutritional and metabolic diseases "
|
||||
2|"IV Endocrine, nutritional and metabolic diseases "|4|" E00 "|" E07 "|" Disorders of thyroid gland "
|
||||
2|"IV Endocrine, nutritional and metabolic diseases "|4|" E10 "|" E14 "|" Diabetes mellitus "
|
||||
2|"IV Endocrine, nutritional and metabolic diseases "|4|" E15 "|" E16 "|" Other disorders of glucose regulation and pancreatic internal secretion "
|
||||
2|"IV Endocrine, nutritional and metabolic diseases "|4|" E20 "|" E35 "|" Disorders of other endocrine glands "
|
||||
2|"IV Endocrine, nutritional and metabolic diseases "|4|" E40 "|" E46 "|" Malnutrition "
|
||||
2|"IV Endocrine, nutritional and metabolic diseases "|4|" E50 "|" E64 "|" Other nutritional deficiencies "
|
||||
2|"IV Endocrine, nutritional and metabolic diseases "|4|" E65 "|" E68 "|" Obesity and other hyperalimentation "
|
||||
2|"IV Endocrine, nutritional and metabolic diseases "|4|" E70 "|" E90 "|" Metabolic disorders "
|
||||
1|"V Mental and behavioural disorders "|5|" F00 "|" F99 "|"V Mental and behavioural disorders "
|
||||
2|"V Mental and behavioural disorders "|5|" F00 "|" F09 "|" Organic, including symptomatic, mental disorders "
|
||||
2|"V Mental and behavioural disorders "|5|" F10 "|" F19 "|" Mental and behavioural disorders due to psychoactive substance use "
|
||||
2|"V Mental and behavioural disorders "|5|" F20 "|" F29 "|" Schizophrenia, schizotypal and delusional disorders "
|
||||
2|"V Mental and behavioural disorders "|5|" F30 "|" F39 "|" Mood [affective] disorders "
|
||||
2|"V Mental and behavioural disorders "|5|" F40 "|" F48 "|" Neurotic, stress-related and somatoform disorders "
|
||||
2|"V Mental and behavioural disorders "|5|" F50 "|" F59 "|" Behavioural syndromes associated with physiological disturbances and physical factors "
|
||||
2|"V Mental and behavioural disorders "|5|" F60 "|" F69 "|" Disorders of adult personality and behaviour "
|
||||
2|"V Mental and behavioural disorders "|5|" F70 "|" F79 "|" Mental retardation "
|
||||
2|"V Mental and behavioural disorders "|5|" F80 "|" F89 "|" Disorders of psychological development "
|
||||
2|"V Mental and behavioural disorders "|5|" F90 "|" F98 "|" Behavioural and emotional disorders with onset usually occurring in childhood and adolescence "
|
||||
2|"V Mental and behavioural disorders "|5|" F99 "|" F99 "|" Unspecified mental disorder "
|
||||
1|"VI Diseases of the nervous system "|6|" G00 "|" G99 "|"VI Diseases of the nervous system "
|
||||
2|"VI Diseases of the nervous system "|6|" G00 "|" G09 "|" Inflammatory diseases of the central nervous system "
|
||||
2|"VI Diseases of the nervous system "|6|" G10 "|" G14 "|" Systemic atrophies primarily affecting the central nervous system "
|
||||
2|"VI Diseases of the nervous system "|6|" G20 "|" G26 "|" Extrapyramidal and movement disorders "
|
||||
2|"VI Diseases of the nervous system "|6|" G30 "|" G32 "|" Other degenerative diseases of the nervous system "
|
||||
2|"VI Diseases of the nervous system "|6|" G35 "|" G37 "|" Demyelinating diseases of the central nervous system "
|
||||
2|"VI Diseases of the nervous system "|6|" G40 "|" G47 "|" Episodic and paroxysmal disorders "
|
||||
2|"VI Diseases of the nervous system "|6|" G50 "|" G59 "|" Nerve, nerve root and plexus disorders "
|
||||
2|"VI Diseases of the nervous system "|6|" G60 "|" G64 "|" Polyneuropathies and other disorders of the peripheral nervous system "
|
||||
2|"VI Diseases of the nervous system "|6|" G70 "|" G73 "|" Diseases of myoneural junction and muscle "
|
||||
2|"VI Diseases of the nervous system "|6|" G80 "|" G83 "|" Cerebral palsy and other paralytic syndromes "
|
||||
2|"VI Diseases of the nervous system "|6|" G90 "|" G99 "|" Other disorders of the nervous system "
|
||||
1|"VII Diseases of the eye and adnexa "|7|" H00 "|" H59 "|"VII Diseases of the eye and adnexa "
|
||||
2|"VII Diseases of the eye and adnexa "|7|" H00 "|" H06 "|" Disorders of eyelid, lacrimal system and orbit "
|
||||
2|"VII Diseases of the eye and adnexa "|7|" H10 "|" H13 "|" Disorders of conjunctiva "
|
||||
2|"VII Diseases of the eye and adnexa "|7|" H15 "|" H22 "|" Disorders of sclera, cornea, iris and ciliary body "
|
||||
2|"VII Diseases of the eye and adnexa "|7|" H25 "|" H28 "|" Disorders of lens "
|
||||
2|"VII Diseases of the eye and adnexa "|7|" H30 "|" H36 "|" Disorders of choroid and retina "
|
||||
2|"VII Diseases of the eye and adnexa "|7|" H40 "|" H42 "|" Glaucoma "
|
||||
2|"VII Diseases of the eye and adnexa "|7|" H43 "|" H45 "|" Disorders of vitreous body and globe "
|
||||
2|"VII Diseases of the eye and adnexa "|7|" H46 "|" H48 "|" Disorders of optic nerve and visual pathways "
|
||||
2|"VII Diseases of the eye and adnexa "|7|" H49 "|" H52 "|" Disorders of ocular muscles, binocular movement, accommodation and refraction "
|
||||
2|"VII Diseases of the eye and adnexa "|7|" H53 "|" H54 "|" Visual disturbances and blindness "
|
||||
2|"VII Diseases of the eye and adnexa "|7|" H55 "|" H59 "|" Other disorders of eye and adnexa "
|
||||
1|"VIII Diseases of the ear and mastoid process "|8|" H60 "|" H95 "|"VIII Diseases of the ear and mastoid process "
|
||||
2|"VIII Diseases of the ear and mastoid process "|8|" H60 "|" H62 "|" Diseases of external ear "
|
||||
2|"VIII Diseases of the ear and mastoid process "|8|" H65 "|" H75 "|" Diseases of middle ear and mastoid "
|
||||
2|"VIII Diseases of the ear and mastoid process "|8|" H80 "|" H83 "|" Diseases of inner ear "
|
||||
2|"VIII Diseases of the ear and mastoid process "|8|" H90 "|" H95 "|" Other disorders of ear "
|
||||
1|"IX Diseases of the circulatory system "|9|" I00 "|" I99 "|"IX Diseases of the circulatory system "
|
||||
2|"IX Diseases of the circulatory system "|9|" I00 "|" I02 "|" Acute rheumatic fever "
|
||||
2|"IX Diseases of the circulatory system "|9|" I05 "|" I09 "|" Chronic rheumatic heart diseases "
|
||||
2|"IX Diseases of the circulatory system "|9|" I10 "|" I15 "|" Hypertensive diseases "
|
||||
2|"IX Diseases of the circulatory system "|9|" I20 "|" I25 "|" Ischaemic heart diseases "
|
||||
2|"IX Diseases of the circulatory system "|9|" I26 "|" I28 "|" Pulmonary heart disease and diseases of pulmonary circulation "
|
||||
2|"IX Diseases of the circulatory system "|9|" I30 "|" I52 "|" Other forms of heart disease "
|
||||
2|"IX Diseases of the circulatory system "|9|" I60 "|" I69 "|" Cerebrovascular diseases "
|
||||
2|"IX Diseases of the circulatory system "|9|" I70 "|" I79 "|" Diseases of arteries, arterioles and capillaries "
|
||||
2|"IX Diseases of the circulatory system "|9|" I80 "|" I89 "|" Diseases of veins, lymphatic vessels and lymph nodes, not elsewhere classified "
|
||||
2|"IX Diseases of the circulatory system "|9|" I95 "|" I99 "|" Other and unspecified disorders of the circulatory system "
|
||||
1|"X Diseases of the respiratory system "|10|" J00 "|" J99 "|"X Diseases of the respiratory system "
|
||||
2|"X Diseases of the respiratory system "|10|" J00 "|" J06 "|" Acute upper respiratory infections "
|
||||
2|"X Diseases of the respiratory system "|10|" J09 "|" J18 "|" Influenza and pneumonia "
|
||||
2|"X Diseases of the respiratory system "|10|" J20 "|" J22 "|" Other acute lower respiratory infections "
|
||||
2|"X Diseases of the respiratory system "|10|" J30 "|" J39 "|" Other diseases of upper respiratory tract "
|
||||
2|"X Diseases of the respiratory system "|10|" J40 "|" J47 "|" Chronic lower respiratory diseases "
|
||||
2|"X Diseases of the respiratory system "|10|" J60 "|" J70 "|" Lung diseases due to external agents "
|
||||
2|"X Diseases of the respiratory system "|10|" J80 "|" J84 "|" Other respiratory diseases principally affecting the interstitium "
|
||||
2|"X Diseases of the respiratory system "|10|" J85 "|" J86 "|" Suppurative and necrotic conditions of lower respiratory tract "
|
||||
2|"X Diseases of the respiratory system "|10|" J90 "|" J94 "|" Other diseases of pleura "
|
||||
2|"X Diseases of the respiratory system "|10|" J95 "|" J99 "|" Other diseases of the respiratory system "
|
||||
1|"XI Diseases of the digestive system "|11|" K00 "|" K93 "|"XI Diseases of the digestive system "
|
||||
2|"XI Diseases of the digestive system "|11|" K00 "|" K14 "|" Diseases of oral cavity, salivary glands and jaws "
|
||||
2|"XI Diseases of the digestive system "|11|" K20 "|" K31 "|" Diseases of oesophagus, stomach and duodenum "
|
||||
2|"XI Diseases of the digestive system "|11|" K35 "|" K38 "|" Diseases of appendix "
|
||||
2|"XI Diseases of the digestive system "|11|" K40 "|" K46 "|" Hernia "
|
||||
2|"XI Diseases of the digestive system "|11|" K50 "|" K52 "|" Noninfective enteritis and colitis "
|
||||
2|"XI Diseases of the digestive system "|11|" K55 "|" K64 "|" Other diseases of intestines "
|
||||
2|"XI Diseases of the digestive system "|11|" K65 "|" K67 "|" Diseases of peritoneum "
|
||||
2|"XI Diseases of the digestive system "|11|" K70 "|" K77 "|" Diseases of liver "
|
||||
2|"XI Diseases of the digestive system "|11|" K80 "|" K87 "|" Disorders of gallbladder, biliary tract and pancreas "
|
||||
2|"XI Diseases of the digestive system "|11|" K90 "|" K93 "|" Other diseases of the digestive system "
|
||||
1|"XII Diseases of the skin and subcutaneous tissue "|12|" L00 "|" L99 "|"XII Diseases of the skin and subcutaneous tissue "
|
||||
2|"XII Diseases of the skin and subcutaneous tissue "|12|" L00 "|" L08 "|" Infections of the skin and subcutaneous tissue "
|
||||
2|"XII Diseases of the skin and subcutaneous tissue "|12|" L10 "|" L14 "|" Bullous disorders "
|
||||
2|"XII Diseases of the skin and subcutaneous tissue "|12|" L20 "|" L30 "|" Dermatitis and eczema "
|
||||
2|"XII Diseases of the skin and subcutaneous tissue "|12|" L40 "|" L45 "|" Papulosquamous disorders "
|
||||
2|"XII Diseases of the skin and subcutaneous tissue "|12|" L50 "|" L54 "|" Urticaria and erythema "
|
||||
2|"XII Diseases of the skin and subcutaneous tissue "|12|" L55 "|" L59 "|" Radiation-related disorders of the skin and subcutaneous tissue "
|
||||
2|"XII Diseases of the skin and subcutaneous tissue "|12|" L60 "|" L75 "|" Disorders of skin appendages "
|
||||
2|"XII Diseases of the skin and subcutaneous tissue "|12|" L80 "|" L99 "|" Other disorders of the skin and subcutaneous tissue "
|
||||
1|"XIII Diseases of the musculoskeletal system and connective tissue "|13|" M00 "|" M99 "|"XIII Diseases of the musculoskeletal system and connective tissue "
|
||||
2|"XIII Diseases of the musculoskeletal system and connective tissue "|13|" M00 "|" M25 "|" Arthropathies "
|
||||
2|"XIII Diseases of the musculoskeletal system and connective tissue "|13|" M30 "|" M36 "|" Systemic connective tissue disorders "
|
||||
2|"XIII Diseases of the musculoskeletal system and connective tissue "|13|" M40 "|" M54 "|" Dorsopathies "
|
||||
2|"XIII Diseases of the musculoskeletal system and connective tissue "|13|" M60 "|" M79 "|" Soft tissue disorders "
|
||||
2|"XIII Diseases of the musculoskeletal system and connective tissue "|13|" M80 "|" M94 "|" Osteopathies and chondropathies "
|
||||
2|"XIII Diseases of the musculoskeletal system and connective tissue "|13|" M95 "|" M99 "|" Other disorders of the musculoskeletal system and connective tissue "
|
||||
1|"XIV Diseases of the genitourinary system "|14|" N00 "|" N99 "|"XIV Diseases of the genitourinary system "
|
||||
2|"XIV Diseases of the genitourinary system "|14|" N00 "|" N08 "|" Glomerular diseases "
|
||||
2|"XIV Diseases of the genitourinary system "|14|" N10 "|" N16 "|" Renal tubulo-interstitial diseases "
|
||||
2|"XIV Diseases of the genitourinary system "|14|" N17 "|" N19 "|" Renal failure "
|
||||
2|"XIV Diseases of the genitourinary system "|14|" N20 "|" N23 "|" Urolithiasis "
|
||||
2|"XIV Diseases of the genitourinary system "|14|" N25 "|" N29 "|" Other disorders of kidney and ureter "
|
||||
2|"XIV Diseases of the genitourinary system "|14|" N30 "|" N39 "|" Other diseases of urinary system "
|
||||
2|"XIV Diseases of the genitourinary system "|14|" N40 "|" N51 "|" Diseases of male genital organs "
|
||||
2|"XIV Diseases of the genitourinary system "|14|" N60 "|" N64 "|" Disorders of breast "
|
||||
2|"XIV Diseases of the genitourinary system "|14|" N70 "|" N77 "|" Inflammatory diseases of female pelvic organs "
|
||||
2|"XIV Diseases of the genitourinary system "|14|" N80 "|" N98 "|" Noninflammatory disorders of female genital tract "
|
||||
2|"XIV Diseases of the genitourinary system "|14|" N99 "|" N99 "|" Other disorders of the genitourinary system "
|
||||
1|"XV Pregnancy, childbirth and the puerperium "|15|" O00 "|" O99 "|"XV Pregnancy, childbirth and the puerperium "
|
||||
2|"XV Pregnancy, childbirth and the puerperium "|15|" O00 "|" O08 "|" Pregnancy with abortive outcome "
|
||||
2|"XV Pregnancy, childbirth and the puerperium "|15|" O10 "|" O16 "|" Oedema, proteinuria and hypertensive disorders in pregnancy, childbirth and the puerperium "
|
||||
2|"XV Pregnancy, childbirth and the puerperium "|15|" O20 "|" O29 "|" Other maternal disorders predominantly related to pregnancy "
|
||||
2|"XV Pregnancy, childbirth and the puerperium "|15|" O30 "|" O48 "|" Maternal care related to the fetus and amniotic cavity and possible delivery problems "
|
||||
2|"XV Pregnancy, childbirth and the puerperium "|15|" O60 "|" O75 "|" Complications of labour and delivery "
|
||||
2|"XV Pregnancy, childbirth and the puerperium "|15|" O80 "|" O84 "|" Delivery "
|
||||
2|"XV Pregnancy, childbirth and the puerperium "|15|" O85 "|" O92 "|" Complications predominantly related to the puerperium "
|
||||
2|"XV Pregnancy, childbirth and the puerperium "|15|" O94 "|" O99 "|" Other obstetric conditions, not elsewhere classified "
|
||||
1|"XVI Certain conditions originating in the perinatal period "|16|" P00 "|" P96 "|"XVI Certain conditions originating in the perinatal period "
|
||||
2|"XVI Certain conditions originating in the perinatal period "|16|" P00 "|" P04 "|" Fetus and newborn affected by maternal factors and by complications of pregnancy, labour and delivery "
|
||||
2|"XVI Certain conditions originating in the perinatal period "|16|" P05 "|" P08 "|" Disorders related to length of gestation and fetal growth "
|
||||
2|"XVI Certain conditions originating in the perinatal period "|16|" P10 "|" P15 "|" Birth trauma "
|
||||
2|"XVI Certain conditions originating in the perinatal period "|16|" P20 "|" P29 "|" Respiratory and cardiovascular disorders specific to the perinatal period "
|
||||
2|"XVI Certain conditions originating in the perinatal period "|16|" P35 "|" P39 "|" Infections specific to the perinatal period "
|
||||
2|"XVI Certain conditions originating in the perinatal period "|16|" P50 "|" P61 "|" Haemorrhagic and haematological disorders of fetus and newborn "
|
||||
2|"XVI Certain conditions originating in the perinatal period "|16|" P70 "|" P74 "|" Transitory endocrine and metabolic disorders specific to fetus and newborn "
|
||||
2|"XVI Certain conditions originating in the perinatal period "|16|" P75 "|" P78 "|" Digestive system disorders of fetus and newborn "
|
||||
2|"XVI Certain conditions originating in the perinatal period "|16|" P80 "|" P83 "|" Conditions involving the integument and temperature regulation of fetus and newborn "
|
||||
2|"XVI Certain conditions originating in the perinatal period "|16|" P90 "|" P96 "|" Other disorders originating in the perinatal period "
|
||||
1|"XVII Congenital malformations, deformations and chromosomal abnormalities "|17|" Q00 "|" Q99 "|"XVII Congenital malformations, deformations and chromosomal abnormalities "
|
||||
2|"XVII Congenital malformations, deformations and chromosomal abnormalities "|17|" Q00 "|" Q07 "|" Congenital malformations of the nervous system "
|
||||
2|"XVII Congenital malformations, deformations and chromosomal abnormalities "|17|" Q10 "|" Q18 "|" Congenital malformations of eye, ear, face and neck "
|
||||
2|"XVII Congenital malformations, deformations and chromosomal abnormalities "|17|" Q20 "|" Q28 "|" Congenital malformations of the circulatory system "
|
||||
2|"XVII Congenital malformations, deformations and chromosomal abnormalities "|17|" Q30 "|" Q34 "|" Congenital malformations of the respiratory system "
|
||||
2|"XVII Congenital malformations, deformations and chromosomal abnormalities "|17|" Q35 "|" Q37 "|" Cleft lip and cleft palate "
|
||||
2|"XVII Congenital malformations, deformations and chromosomal abnormalities "|17|" Q38 "|" Q45 "|" Other congenital malformations of the digestive system "
|
||||
2|"XVII Congenital malformations, deformations and chromosomal abnormalities "|17|" Q50 "|" Q56 "|" Congenital malformations of genital organs "
|
||||
2|"XVII Congenital malformations, deformations and chromosomal abnormalities "|17|" Q60 "|" Q64 "|" Congenital malformations of the urinary system "
|
||||
2|"XVII Congenital malformations, deformations and chromosomal abnormalities "|17|" Q65 "|" Q79 "|" Congenital malformations and deformations of the musculoskeletal system "
|
||||
2|"XVII Congenital malformations, deformations and chromosomal abnormalities "|17|" Q80 "|" Q89 "|" Other congenital malformations "
|
||||
2|"XVII Congenital malformations, deformations and chromosomal abnormalities "|17|" Q90 "|" Q99 "|" Chromosomal abnormalities, not elsewhere classified "
|
||||
1|"XVIII Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified "|18|" R00 "|" R99 "|"XVIII Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified "
|
||||
2|"XVIII Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified "|18|" R00 "|" R09 "|" Symptoms and signs involving the circulatory and respiratory systems "
|
||||
2|"XVIII Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified "|18|" R10 "|" R19 "|" Symptoms and signs involving the digestive system and abdomen "
|
||||
2|"XVIII Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified "|18|" R20 "|" R23 "|" Symptoms and signs involving the skin and subcutaneous tissue "
|
||||
2|"XVIII Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified "|18|" R25 "|" R29 "|" Symptoms and signs involving the nervous and musculoskeletal systems "
|
||||
2|"XVIII Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified "|18|" R30 "|" R39 "|" Symptoms and signs involving the urinary system "
|
||||
2|"XVIII Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified "|18|" R40 "|" R46 "|" Symptoms and signs involving cognition, perception, emotional state and behaviour "
|
||||
2|"XVIII Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified "|18|" R47 "|" R49 "|" Symptoms and signs involving speech and voice "
|
||||
2|"XVIII Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified "|18|" R50 "|" R69 "|" General symptoms and signs "
|
||||
2|"XVIII Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified "|18|" R70 "|" R79 "|" Abnormal findings on examination of blood, without diagnosis "
|
||||
2|"XVIII Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified "|18|" R80 "|" R82 "|" Abnormal findings on examination of urine, without diagnosis "
|
||||
2|"XVIII Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified "|18|" R83 "|" R89 "|" Abnormal findings on examination of other body fluids, substances and tissues, without diagnosis "
|
||||
2|"XVIII Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified "|18|" R90 "|" R94 "|" Abnormal findings on diagnostic imaging and in function studies, without diagnosis "
|
||||
2|"XVIII Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified "|18|" R95 "|" R99 "|" Ill-defined and unknown causes of mortality "
|
||||
1|"XIX Injury, poisoning and certain other consequences of external causes "|19|" S00 "|" T98 "|"XIX Injury, poisoning and certain other consequences of external causes "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" S00 "|" S09 "|" Injuries to the head "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" S10 "|" S19 "|" Injuries to the neck "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" S20 "|" S29 "|" Injuries to the thorax "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" S30 "|" S39 "|" Injuries to the abdomen, lower back, lumbar spine and pelvis "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" S40 "|" S49 "|" Injuries to the shoulder and upper arm "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" S50 "|" S59 "|" Injuries to the elbow and forearm "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" S60 "|" S69 "|" Injuries to the wrist and hand "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" S70 "|" S79 "|" Injuries to the hip and thigh "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" S80 "|" S89 "|" Injuries to the knee and lower leg "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" S90 "|" S99 "|" Injuries to the ankle and foot "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" T00 "|" T07 "|" Injuries involving multiple body regions "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" T08 "|" T14 "|" Injuries to unspecified part of trunk, limb or body region "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" T15 "|" T19 "|" Effects of foreign body entering through natural orifice "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" T20 "|" T32 "|" Burns and corrosions "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" T33 "|" T35 "|" Frostbite "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" T36 "|" T50 "|" Poisoning by drugs, medicaments and biological substances "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" T51 "|" T65 "|" Toxic effects of substances chiefly nonmedicinal as to source "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" T66 "|" T78 "|" Other and unspecified effects of external causes "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" T79 "|" T79 "|" Certain early complications of trauma "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" T80 "|" T88 "|" Complications of surgical and medical care, not elsewhere classified "
|
||||
2|"XIX Injury, poisoning and certain other consequences of external causes "|19|" T90 "|" T98 "|" Sequelae of injuries, of poisoning and of other consequences of external causes "
|
||||
1|"XX External causes of morbidity and mortality "|20|" V01 "|" Y98 "|"XX External causes of morbidity and mortality "
|
||||
2|"XX External causes of morbidity and mortality "|20|" V01 "|" X59 "|" Accidents "
|
||||
2|"XX External causes of morbidity and mortality "|20|" X60 "|" X84 "|" Intentional self-harm "
|
||||
2|"XX External causes of morbidity and mortality "|20|" X85 "|" Y09 "|" Assault "
|
||||
2|"XX External causes of morbidity and mortality "|20|" Y10 "|" Y34 "|" Event of undetermined intent "
|
||||
2|"XX External causes of morbidity and mortality "|20|" Y35 "|" Y36 "|" Legal intervention and operations of war "
|
||||
2|"XX External causes of morbidity and mortality "|20|" Y40 "|" Y84 "|" Complications of medical and surgical care "
|
||||
2|"XX External causes of morbidity and mortality "|20|" Y85 "|" Y89 "|" Sequelae of external causes of morbidity and mortality "
|
||||
2|"XX External causes of morbidity and mortality "|20|" Y90 "|" Y98 "|" Supplementary factors related to causes of morbidity and mortality classified elsewhere "
|
||||
1|"XXI Factors influencing health status and contact with health services "|21|" Z00 "|" Z99 "|"XXI Factors influencing health status and contact with health services "
|
||||
2|"XXI Factors influencing health status and contact with health services "|21|" Z00 "|" Z13 "|" Persons encountering health services for examination and investigation "
|
||||
2|"XXI Factors influencing health status and contact with health services "|21|" Z20 "|" Z29 "|" Persons with potential health hazards related to communicable diseases "
|
||||
2|"XXI Factors influencing health status and contact with health services "|21|" Z30 "|" Z39 "|" Persons encountering health services in circumstances related to reproduction "
|
||||
2|"XXI Factors influencing health status and contact with health services "|21|" Z40 "|" Z54 "|" Persons encountering health services for specific procedures and health care "
|
||||
2|"XXI Factors influencing health status and contact with health services "|21|" Z55 "|" Z65 "|" Persons with potential health hazards related to socioeconomic and psychosocial circumstances "
|
||||
2|"XXI Factors influencing health status and contact with health services "|21|" Z70 "|" Z76 "|" Persons encountering health services in other circumstances "
|
||||
2|"XXI Factors influencing health status and contact with health services "|21|" Z80 "|" Z99 "|" Persons with potential health hazards related to family and personal history and certain conditions influencing health status "
|
||||
1|"XXII Codes for special purposes "|22|" U00 "|" U85 "|"XXII Codes for special purposes "
|
||||
2|"XXII Codes for special purposes "|22|" U00 "|" U49 "|" Provisional assignment of new diseases of uncertain etiology or emergency use "
|
||||
2|"XXII Codes for special purposes "|22|" U82 "|" U85 "|" Resistance to antimicrobial and antineoplastic drugs "
|
||||
@ -0,0 +1,225 @@
|
||||
A00 | A09 | Intestinal infectious diseases
|
||||
A15 | A19 | Tuberculosis
|
||||
A20 | A28 | Certain zoonotic bacterial diseases
|
||||
A30 | A49 | Other bacterial diseases
|
||||
A50 | A64 | Infections with a predominantly sexual mode of transmission
|
||||
A65 | A69 | Other spirochaetal diseases
|
||||
A70 | A74 | Other diseases caused by chlamydiae
|
||||
A75 | A79 | Rickettsioses
|
||||
A80 | A89 | Viral infections of the central nervous system
|
||||
A92 | A99 | Arthropod-borne viral fevers and viral haemorrhagic fevers
|
||||
B00 | B09 | Viral infections characterized by skin and mucous membrane lesions
|
||||
B15 | B19 | Viral hepatitis
|
||||
B20 | B24 | Human immunodeficiency virus [HIV] disease
|
||||
B25 | B34 | Other viral diseases
|
||||
B35 | B49 | Mycoses
|
||||
B50 | B64 | Protozoal diseases
|
||||
B65 | B83 | Helminthiases
|
||||
B85 | B89 | Pediculosis, acariasis and other infestations
|
||||
B90 | B94 | Sequelae of infectious and parasitic diseases
|
||||
B95 | B98 | Bacterial, viral and other infectious agents
|
||||
B99 | B99 | Other infectious diseases
|
||||
C00 | C14 | Malignant neoplasms of lip, oral cavity and pharynx
|
||||
C15 | C26 | Malignant neoplasms of digestive organs
|
||||
C30 | C39 | Malignant neoplasms of respiratory and intrathoracic organs
|
||||
C40 | C41 | Malignant neoplasms of bone and articular cartilage
|
||||
C43 | C44 | Melanoma and other malignant neoplasms of skin
|
||||
C45 | C49 | Malignant neoplasms of mesothelial and soft tissue
|
||||
C50 | C50 | Malignant neoplasm of breast
|
||||
C51 | C58 | Malignant neoplasms of female genital organs
|
||||
C60 | C63 | Malignant neoplasms of male genital organs
|
||||
C64 | C68 | Malignant neoplasms of urinary tract
|
||||
C69 | C72 | Malignant neoplasms of eye, brain and other parts of central nervous system
|
||||
C73 | C75 | Malignant neoplasms of thyroid and other endocrine glands
|
||||
C76 | C80 | Malignant neoplasms of ill-defined, secondary and unspecified sites
|
||||
C81 | C96 | Malignant neoplasms, stated or presumed to be primary, of lymphoid, haematopoietic and related tissue
|
||||
C97 | C97 | Malignant neoplasms of independent (primary) multiple sites
|
||||
D00 | D09 | In situ neoplasms
|
||||
D10 | D36 | Benign neoplasms
|
||||
D37 | D48 | Neoplasms of uncertain or unknown behaviour
|
||||
D50 | D53 | Nutritional anaemias
|
||||
D55 | D59 | Haemolytic anaemias
|
||||
D60 | D64 | Aplastic and other anaemias
|
||||
D65 | D69 | Coagulation defects, purpura and other haemorrhagic conditions
|
||||
D70 | D77 | Other diseases of blood and blood-forming organs
|
||||
D80 | D89 | Certain disorders involving the immune mechanism
|
||||
E00 | E07 | Disorders of thyroid gland
|
||||
E10 | E14 | Diabetes mellitus
|
||||
E15 | E16 | Other disorders of glucose regulation and pancreatic internal secretion
|
||||
E20 | E35 | Disorders of other endocrine glands
|
||||
E40 | E46 | Malnutrition
|
||||
E50 | E64 | Other nutritional deficiencies
|
||||
E65 | E68 | Obesity and other hyperalimentation
|
||||
E70 | E90 | Metabolic disorders
|
||||
F00 | F09 | Organic, including symptomatic, mental disorders
|
||||
F10 | F19 | Mental and behavioural disorders due to psychoactive substance use
|
||||
F20 | F29 | Schizophrenia, schizotypal and delusional disorders
|
||||
F30 | F39 | Mood [affective] disorders
|
||||
F40 | F48 | Neurotic, stress-related and somatoform disorders
|
||||
F50 | F59 | Behavioural syndromes associated with physiological disturbances and physical factors
|
||||
F60 | F69 | Disorders of adult personality and behaviour
|
||||
F70 | F79 | Mental retardation
|
||||
F80 | F89 | Disorders of psychological development
|
||||
F90 | F98 | Behavioural and emotional disorders with onset usually occurring in childhood and adolescence
|
||||
F99 | F99 | Unspecified mental disorder
|
||||
G00 | G09 | Inflammatory diseases of the central nervous system
|
||||
G10 | G14 | Systemic atrophies primarily affecting the central nervous system
|
||||
G20 | G26 | Extrapyramidal and movement disorders
|
||||
G30 | G32 | Other degenerative diseases of the nervous system
|
||||
G35 | G37 | Demyelinating diseases of the central nervous system
|
||||
G40 | G47 | Episodic and paroxysmal disorders
|
||||
G50 | G59 | Nerve, nerve root and plexus disorders
|
||||
G60 | G64 | Polyneuropathies and other disorders of the peripheral nervous system
|
||||
G70 | G73 | Diseases of myoneural junction and muscle
|
||||
G80 | G83 | Cerebral palsy and other paralytic syndromes
|
||||
G90 | G99 | Other disorders of the nervous system
|
||||
H00 | H06 | Disorders of eyelid, lacrimal system and orbit
|
||||
H10 | H13 | Disorders of conjunctiva
|
||||
H15 | H22 | Disorders of sclera, cornea, iris and ciliary body
|
||||
H25 | H28 | Disorders of lens
|
||||
H30 | H36 | Disorders of choroid and retina
|
||||
H40 | H42 | Glaucoma
|
||||
H43 | H45 | Disorders of vitreous body and globe
|
||||
H46 | H48 | Disorders of optic nerve and visual pathways
|
||||
H49 | H52 | Disorders of ocular muscles, binocular movement, accommodation and refraction
|
||||
H53 | H54 | Visual disturbances and blindness
|
||||
H55 | H59 | Other disorders of eye and adnexa
|
||||
H60 | H62 | Diseases of external ear
|
||||
H65 | H75 | Diseases of middle ear and mastoid
|
||||
H80 | H83 | Diseases of inner ear
|
||||
H90 | H95 | Other disorders of ear
|
||||
I00 | I02 | Acute rheumatic fever
|
||||
I05 | I09 | Chronic rheumatic heart diseases
|
||||
I10 | I15 | Hypertensive diseases
|
||||
I20 | I25 | Ischaemic heart diseases
|
||||
I26 | I28 | Pulmonary heart disease and diseases of pulmonary circulation
|
||||
I30 | I52 | Other forms of heart disease
|
||||
I60 | I69 | Cerebrovascular diseases
|
||||
I70 | I79 | Diseases of arteries, arterioles and capillaries
|
||||
I80 | I89 | Diseases of veins, lymphatic vessels and lymph nodes, not elsewhere classified
|
||||
I95 | I99 | Other and unspecified disorders of the circulatory system
|
||||
J00 | J06 | Acute upper respiratory infections
|
||||
J09 | J18 | Influenza and pneumonia
|
||||
J20 | J22 | Other acute lower respiratory infections
|
||||
J30 | J39 | Other diseases of upper respiratory tract
|
||||
J40 | J47 | Chronic lower respiratory diseases
|
||||
J60 | J70 | Lung diseases due to external agents
|
||||
J80 | J84 | Other respiratory diseases principally affecting the interstitium
|
||||
J85 | J86 | Suppurative and necrotic conditions of lower respiratory tract
|
||||
J90 | J94 | Other diseases of pleura
|
||||
J95 | J99 | Other diseases of the respiratory system
|
||||
K00 | K14 | Diseases of oral cavity, salivary glands and jaws
|
||||
K20 | K31 | Diseases of oesophagus, stomach and duodenum
|
||||
K35 | K38 | Diseases of appendix
|
||||
K40 | K46 | Hernia
|
||||
K50 | K52 | Noninfective enteritis and colitis
|
||||
K55 | K64 | Other diseases of intestines
|
||||
K65 | K67 | Diseases of peritoneum
|
||||
K70 | K77 | Diseases of liver
|
||||
K80 | K87 | Disorders of gallbladder, biliary tract and pancreas
|
||||
K90 | K93 | Other diseases of the digestive system
|
||||
L00 | L08 | Infections of the skin and subcutaneous tissue
|
||||
L10 | L14 | Bullous disorders
|
||||
L20 | L30 | Dermatitis and eczema
|
||||
L40 | L45 | Papulosquamous disorders
|
||||
L50 | L54 | Urticaria and erythema
|
||||
L55 | L59 | Radiation-related disorders of the skin and subcutaneous tissue
|
||||
L60 | L75 | Disorders of skin appendages
|
||||
L80 | L99 | Other disorders of the skin and subcutaneous tissue
|
||||
M00 | M25 | Arthropathies
|
||||
M30 | M36 | Systemic connective tissue disorders
|
||||
M40 | M54 | Dorsopathies
|
||||
M60 | M79 | Soft tissue disorders
|
||||
M80 | M94 | Osteopathies and chondropathies
|
||||
M95 | M99 | Other disorders of the musculoskeletal system and connective tissue
|
||||
N00 | N08 | Glomerular diseases
|
||||
N10 | N16 | Renal tubulo-interstitial diseases
|
||||
N17 | N19 | Renal failure
|
||||
N20 | N23 | Urolithiasis
|
||||
N25 | N29 | Other disorders of kidney and ureter
|
||||
N30 | N39 | Other diseases of urinary system
|
||||
N40 | N51 | Diseases of male genital organs
|
||||
N60 | N64 | Disorders of breast
|
||||
N70 | N77 | Inflammatory diseases of female pelvic organs
|
||||
N80 | N98 | Noninflammatory disorders of female genital tract
|
||||
N99 | N99 | Other disorders of the genitourinary system
|
||||
O00 | O08 | Pregnancy with abortive outcome
|
||||
O10 | O16 | Oedema, proteinuria and hypertensive disorders in pregnancy, childbirth and the puerperium
|
||||
O20 | O29 | Other maternal disorders predominantly related to pregnancy
|
||||
O30 | O48 | Maternal care related to the fetus and amniotic cavity and possible delivery problems
|
||||
O60 | O75 | Complications of labour and delivery
|
||||
O80 | O84 | Delivery
|
||||
O85 | O92 | Complications predominantly related to the puerperium
|
||||
O94 | O99 | Other obstetric conditions, not elsewhere classified
|
||||
P00 | P04 | Fetus and newborn affected by maternal factors and by complications of pregnancy, labour and delivery
|
||||
P05 | P08 | Disorders related to length of gestation and fetal growth
|
||||
P10 | P15 | Birth trauma
|
||||
P20 | P29 | Respiratory and cardiovascular disorders specific to the perinatal period
|
||||
P35 | P39 | Infections specific to the perinatal period
|
||||
P50 | P61 | Haemorrhagic and haematological disorders of fetus and newborn
|
||||
P70 | P74 | Transitory endocrine and metabolic disorders specific to fetus and newborn
|
||||
P75 | P78 | Digestive system disorders of fetus and newborn
|
||||
P80 | P83 | Conditions involving the integument and temperature regulation of fetus and newborn
|
||||
P90 | P96 | Other disorders originating in the perinatal period
|
||||
Q00 | Q07 | Congenital malformations of the nervous system
|
||||
Q10 | Q18 | Congenital malformations of eye, ear, face and neck
|
||||
Q20 | Q28 | Congenital malformations of the circulatory system
|
||||
Q30 | Q34 | Congenital malformations of the respiratory system
|
||||
Q35 | Q37 | Cleft lip and cleft palate
|
||||
Q38 | Q45 | Other congenital malformations of the digestive system
|
||||
Q50 | Q56 | Congenital malformations of genital organs
|
||||
Q60 | Q64 | Congenital malformations of the urinary system
|
||||
Q65 | Q79 | Congenital malformations and deformations of the musculoskeletal system
|
||||
Q80 | Q89 | Other congenital malformations
|
||||
Q90 | Q99 | Chromosomal abnormalities, not elsewhere classified
|
||||
R00 | R09 | Symptoms and signs involving the circulatory and respiratory systems
|
||||
R10 | R19 | Symptoms and signs involving the digestive system and abdomen
|
||||
R20 | R23 | Symptoms and signs involving the skin and subcutaneous tissue
|
||||
R25 | R29 | Symptoms and signs involving the nervous and musculoskeletal systems
|
||||
R30 | R39 | Symptoms and signs involving the urinary system
|
||||
R40 | R46 | Symptoms and signs involving cognition, perception, emotional state and behaviour
|
||||
R47 | R49 | Symptoms and signs involving speech and voice
|
||||
R50 | R69 | General symptoms and signs
|
||||
R70 | R79 | Abnormal findings on examination of blood, without diagnosis
|
||||
R80 | R82 | Abnormal findings on examination of urine, without diagnosis
|
||||
R83 | R89 | Abnormal findings on examination of other body fluids, substances and tissues, without diagnosis
|
||||
R90 | R94 | Abnormal findings on diagnostic imaging and in function studies, without diagnosis
|
||||
R95 | R99 | Ill-defined and unknown causes of mortality
|
||||
S00 | S09 | Injuries to the head
|
||||
S10 | S19 | Injuries to the neck
|
||||
S20 | S29 | Injuries to the thorax
|
||||
S30 | S39 | Injuries to the abdomen, lower back, lumbar spine and pelvis
|
||||
S40 | S49 | Injuries to the shoulder and upper arm
|
||||
S50 | S59 | Injuries to the elbow and forearm
|
||||
S60 | S69 | Injuries to the wrist and hand
|
||||
S70 | S79 | Injuries to the hip and thigh
|
||||
S80 | S89 | Injuries to the knee and lower leg
|
||||
S90 | S99 | Injuries to the ankle and foot
|
||||
T00 | T07 | Injuries involving multiple body regions
|
||||
T08 | T14 | Injuries to unspecified part of trunk, limb or body region
|
||||
T15 | T19 | Effects of foreign body entering through natural orifice
|
||||
T20 | T32 | Burns and corrosions
|
||||
T33 | T35 | Frostbite
|
||||
T36 | T50 | Poisoning by drugs, medicaments and biological substances
|
||||
T51 | T65 | Toxic effects of substances chiefly nonmedicinal as to source
|
||||
T66 | T78 | Other and unspecified effects of external causes
|
||||
T79 | T79 | Certain early complications of trauma
|
||||
T80 | T88 | Complications of surgical and medical care, not elsewhere classified
|
||||
T90 | T98 | Sequelae of injuries, of poisoning and of other consequences of external causes
|
||||
V01 | X59 | Accidents
|
||||
X60 | X84 | Intentional self-harm
|
||||
X85 | Y09 | Assault
|
||||
Y10 | Y34 | Event of undetermined intent
|
||||
Y35 | Y36 | Legal intervention and operations of war
|
||||
Y40 | Y84 | Complications of medical and surgical care
|
||||
Y85 | Y89 | Sequelae of external causes of morbidity and mortality
|
||||
Y90 | Y98 | Supplementary factors related to causes of morbidity and mortality classified elsewhere
|
||||
Z00 | Z13 | Persons encountering health services for examination and investigation
|
||||
Z20 | Z29 | Persons with potential health hazards related to communicable diseases
|
||||
Z30 | Z39 | Persons encountering health services in circumstances related to reproduction
|
||||
Z40 | Z54 | Persons encountering health services for specific procedures and health care
|
||||
Z55 | Z65 | Persons with potential health hazards related to socioeconomic and psychosocial circumstances
|
||||
Z70 | Z76 | Persons encountering health services in other circumstances
|
||||
Z80 | Z99 | Persons with potential health hazards related to family and personal history and certain conditions influencing health status
|
||||
U00 | U49 | Provisional assignment of new diseases of uncertain etiology or emergency use
|
||||
U82 | U85 | Resistance to antimicrobial and antineoplastic drugs
|
||||
Loading…
Reference in New Issue