From 495955170c00dbe3c1316f403661311f89a3b08d Mon Sep 17 00:00:00 2001
From: will king <youainti@protonmail.com>
Date: Sat, 7 Sep 2024 10:20:06 -0700
Subject: [PATCH] changed data setup path for clarity

---
 .../Icd10ConditionsMatching/Icd10ConditionsMatching/__init__.py   | 0
 .../Icd10ConditionsMatching/db_interface.py                       | 0
 .../Icd10ConditionsMatching/Icd10ConditionsMatching/login.py      | 0
 .../Icd10ConditionsMatching/Icd10ConditionsMatching/model.py      | 0
 .../Icd10ConditionsMatching/templates/base.html                   | 0
 .../Icd10ConditionsMatching/templates/validation_index.html       | 0
 .../Icd10ConditionsMatching/templates/validation_of_trial.html    | 0
 .../Icd10ConditionsMatching/Icd10ConditionsMatching/validation.py | 0
 {scripts => data_mgmt_scripts}/Icd10ConditionsMatching/setup.py   | 0
 {scripts => data_mgmt_scripts}/Icd10ConditionsMatching/start.sh   | 0
 {scripts => data_mgmt_scripts}/db_connection_test.py              | 0
 {scripts => data_mgmt_scripts}/download_tests.py                  | 0
 {scripts => data_mgmt_scripts}/drugtools/__init__.py              | 0
 .../drugtools/download_and_extract_nsde.py                        | 0
 {scripts => data_mgmt_scripts}/drugtools/env_setup.py             | 0
 .../drugtools/historical_nct_downloader.py                        | 0
 .../drugtools/historical_nct_extractor.py                         | 0
 .../drugtools/historical_trial_selector.py                        | 0
 {scripts => data_mgmt_scripts}/drugtools/migrate_mysql2pgsql.py   | 0
 {scripts => data_mgmt_scripts}/drugtools/selected_trials.sql      | 0
 {scripts => data_mgmt_scripts}/import-icd10_to_cause.py           | 0
 {scripts => data_mgmt_scripts}/rm_data.sh                         | 0
 {scripts => data_mgmt_scripts}/runall.py                          | 0
 {scripts => data_mgmt_scripts}/umls_requests.py                   | 0
 24 files changed, 0 insertions(+), 0 deletions(-)
 rename {scripts => data_mgmt_scripts}/Icd10ConditionsMatching/Icd10ConditionsMatching/__init__.py (100%)
 rename {scripts => data_mgmt_scripts}/Icd10ConditionsMatching/Icd10ConditionsMatching/db_interface.py (100%)
 rename {scripts => data_mgmt_scripts}/Icd10ConditionsMatching/Icd10ConditionsMatching/login.py (100%)
 rename {scripts => data_mgmt_scripts}/Icd10ConditionsMatching/Icd10ConditionsMatching/model.py (100%)
 rename {scripts => data_mgmt_scripts}/Icd10ConditionsMatching/Icd10ConditionsMatching/templates/base.html (100%)
 rename {scripts => data_mgmt_scripts}/Icd10ConditionsMatching/Icd10ConditionsMatching/templates/validation_index.html (100%)
 rename {scripts => data_mgmt_scripts}/Icd10ConditionsMatching/Icd10ConditionsMatching/templates/validation_of_trial.html (100%)
 rename {scripts => data_mgmt_scripts}/Icd10ConditionsMatching/Icd10ConditionsMatching/validation.py (100%)
 rename {scripts => data_mgmt_scripts}/Icd10ConditionsMatching/setup.py (100%)
 rename {scripts => data_mgmt_scripts}/Icd10ConditionsMatching/start.sh (100%)
 rename {scripts => data_mgmt_scripts}/db_connection_test.py (100%)
 rename {scripts => data_mgmt_scripts}/download_tests.py (100%)
 rename {scripts => data_mgmt_scripts}/drugtools/__init__.py (100%)
 rename {scripts => data_mgmt_scripts}/drugtools/download_and_extract_nsde.py (100%)
 rename {scripts => data_mgmt_scripts}/drugtools/env_setup.py (100%)
 rename {scripts => data_mgmt_scripts}/drugtools/historical_nct_downloader.py (100%)
 rename {scripts => data_mgmt_scripts}/drugtools/historical_nct_extractor.py (100%)
 rename {scripts => data_mgmt_scripts}/drugtools/historical_trial_selector.py (100%)
 rename {scripts => data_mgmt_scripts}/drugtools/migrate_mysql2pgsql.py (100%)
 rename {scripts => data_mgmt_scripts}/drugtools/selected_trials.sql (100%)
 rename {scripts => data_mgmt_scripts}/import-icd10_to_cause.py (100%)
 rename {scripts => data_mgmt_scripts}/rm_data.sh (100%)
 rename {scripts => data_mgmt_scripts}/runall.py (100%)
 rename {scripts => data_mgmt_scripts}/umls_requests.py (100%)

diff --git a/scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/__init__.py b/data_mgmt_scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/__init__.py
similarity index 100%
rename from scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/__init__.py
rename to data_mgmt_scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/__init__.py
diff --git a/scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/db_interface.py b/data_mgmt_scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/db_interface.py
similarity index 100%
rename from scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/db_interface.py
rename to data_mgmt_scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/db_interface.py
diff --git a/scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/login.py b/data_mgmt_scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/login.py
similarity index 100%
rename from scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/login.py
rename to data_mgmt_scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/login.py
diff --git a/scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/model.py b/data_mgmt_scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/model.py
similarity index 100%
rename from scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/model.py
rename to data_mgmt_scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/model.py
diff --git a/scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/templates/base.html b/data_mgmt_scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/templates/base.html
similarity index 100%
rename from scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/templates/base.html
rename to data_mgmt_scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/templates/base.html
diff --git a/scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/templates/validation_index.html b/data_mgmt_scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/templates/validation_index.html
similarity index 100%
rename from scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/templates/validation_index.html
rename to data_mgmt_scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/templates/validation_index.html
diff --git a/scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/templates/validation_of_trial.html b/data_mgmt_scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/templates/validation_of_trial.html
similarity index 100%
rename from scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/templates/validation_of_trial.html
rename to data_mgmt_scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/templates/validation_of_trial.html
diff --git a/scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/validation.py b/data_mgmt_scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/validation.py
similarity index 100%
rename from scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/validation.py
rename to data_mgmt_scripts/Icd10ConditionsMatching/Icd10ConditionsMatching/validation.py
diff --git a/scripts/Icd10ConditionsMatching/setup.py b/data_mgmt_scripts/Icd10ConditionsMatching/setup.py
similarity index 100%
rename from scripts/Icd10ConditionsMatching/setup.py
rename to data_mgmt_scripts/Icd10ConditionsMatching/setup.py
diff --git a/scripts/Icd10ConditionsMatching/start.sh b/data_mgmt_scripts/Icd10ConditionsMatching/start.sh
similarity index 100%
rename from scripts/Icd10ConditionsMatching/start.sh
rename to data_mgmt_scripts/Icd10ConditionsMatching/start.sh
diff --git a/scripts/db_connection_test.py b/data_mgmt_scripts/db_connection_test.py
similarity index 100%
rename from scripts/db_connection_test.py
rename to data_mgmt_scripts/db_connection_test.py
diff --git a/scripts/download_tests.py b/data_mgmt_scripts/download_tests.py
similarity index 100%
rename from scripts/download_tests.py
rename to data_mgmt_scripts/download_tests.py
diff --git a/scripts/drugtools/__init__.py b/data_mgmt_scripts/drugtools/__init__.py
similarity index 100%
rename from scripts/drugtools/__init__.py
rename to data_mgmt_scripts/drugtools/__init__.py
diff --git a/scripts/drugtools/download_and_extract_nsde.py b/data_mgmt_scripts/drugtools/download_and_extract_nsde.py
similarity index 100%
rename from scripts/drugtools/download_and_extract_nsde.py
rename to data_mgmt_scripts/drugtools/download_and_extract_nsde.py
diff --git a/scripts/drugtools/env_setup.py b/data_mgmt_scripts/drugtools/env_setup.py
similarity index 100%
rename from scripts/drugtools/env_setup.py
rename to data_mgmt_scripts/drugtools/env_setup.py
diff --git a/scripts/drugtools/historical_nct_downloader.py b/data_mgmt_scripts/drugtools/historical_nct_downloader.py
similarity index 100%
rename from scripts/drugtools/historical_nct_downloader.py
rename to data_mgmt_scripts/drugtools/historical_nct_downloader.py
diff --git a/scripts/drugtools/historical_nct_extractor.py b/data_mgmt_scripts/drugtools/historical_nct_extractor.py
similarity index 100%
rename from scripts/drugtools/historical_nct_extractor.py
rename to data_mgmt_scripts/drugtools/historical_nct_extractor.py
diff --git a/scripts/drugtools/historical_trial_selector.py b/data_mgmt_scripts/drugtools/historical_trial_selector.py
similarity index 100%
rename from scripts/drugtools/historical_trial_selector.py
rename to data_mgmt_scripts/drugtools/historical_trial_selector.py
diff --git a/scripts/drugtools/migrate_mysql2pgsql.py b/data_mgmt_scripts/drugtools/migrate_mysql2pgsql.py
similarity index 100%
rename from scripts/drugtools/migrate_mysql2pgsql.py
rename to data_mgmt_scripts/drugtools/migrate_mysql2pgsql.py
diff --git a/scripts/drugtools/selected_trials.sql b/data_mgmt_scripts/drugtools/selected_trials.sql
similarity index 100%
rename from scripts/drugtools/selected_trials.sql
rename to data_mgmt_scripts/drugtools/selected_trials.sql
diff --git a/scripts/import-icd10_to_cause.py b/data_mgmt_scripts/import-icd10_to_cause.py
similarity index 100%
rename from scripts/import-icd10_to_cause.py
rename to data_mgmt_scripts/import-icd10_to_cause.py
diff --git a/scripts/rm_data.sh b/data_mgmt_scripts/rm_data.sh
similarity index 100%
rename from scripts/rm_data.sh
rename to data_mgmt_scripts/rm_data.sh
diff --git a/scripts/runall.py b/data_mgmt_scripts/runall.py
similarity index 100%
rename from scripts/runall.py
rename to data_mgmt_scripts/runall.py
diff --git a/scripts/umls_requests.py b/data_mgmt_scripts/umls_requests.py
similarity index 100%
rename from scripts/umls_requests.py
rename to data_mgmt_scripts/umls_requests.py