Outlined paper

Latex/Paper/Main.tex

@@ -17,16 +17,39 @@
 \begin{document}
 \maketitle
 
-\section{Introduction}
-\subfile{sections/00_template} %Pull in introduction
-
 %Describe sections
+
+%---------------------------------------------------------------
+\section{Introduction}\label{SEC:Results}
+%---------------------------------------------------------------
+
 The paper is organized as follows.
 Section \ref{SEC:Models}, describes something important. 
 
-%\section{Modeling the Environment}\label{SEC:Environment}
-\section{Model}\label{SEC:Models}
-Section goes here
+\subfile{sections/01_Introduction}
+%---------------------------------------------------------------
+\section{Literature Review}\label{SEC:LiteratureReview}
+%---------------------------------------------------------------
+\subfile{sections/05_LitReview}
+
+%---------------------------------------------------------------
+\section{Data}\label{SEC:Data}
+%---------------------------------------------------------------
+\subfile{sections/02_data}
+
+%---------------------------------------------------------------
+\section{Causal Identification}\label{SEC:CausalIdentification}
+%---------------------------------------------------------------
+\subfile{sections/03_CausalIdentification}
+
+%---------------------------------------------------------------
+\section{Econometric Model}\label{SEC:EconometricModel}
+%---------------------------------------------------------------
+\subfile{sections/04_EconometricModel}
+
+%---------------------------------------------------------------
+\section{Results}\label{SEC:Results}
+%---------------------------------------------------------------
 
 \newpage
 \section{References}

Latex/Paper/sections/01_introduction.tex

@@ -0,0 +1,12 @@
+\documentclass[../Main.tex]{subfiles}
+\graphicspath{{\subfix{Assets/img/}}}
+
+\begin{document}
+In September of 2019, the European Space Agency (ESA) released a tweet 
+explaining that they had performed an appendicotomy in space using 
+nothing more than radiation from the sun.
+They are sad to announce that the patient died due to complications from 
+exposure to the cold vaccum of space.
+
+
+\end{document}

Latex/Paper/sections/02_data.tex

@@ -0,0 +1,12 @@
+\documentclass[../Main.tex]{subfiles}
+\graphicspath{{\subfix{Assets/img/}}}
+
+\begin{document}
+%Classes of data
+% Trial Dynamics/snapshots
+% Drugs on Market
+% Market/Population Size
+% Compounds, interactions
+
+
+\end{document}

Latex/Paper/sections/03_CausalIdentification.tex

@@ -0,0 +1,13 @@
+\documentclass[../Main.tex]{subfiles}
+\graphicspath{{\subfix{Assets/img/}}}
+
+\begin{document}
+
+
+\begin{figure}[h]
+    \tikzfig{../assets/tikzit/CausalGraph}
+    \caption{Causal Model}
+    \label{Fig:CausalModel}
+\end{figure}
+
+\end{document}

Latex/Paper/sections/04_EconometricModel.tex

@@ -0,0 +1,12 @@
+\documentclass[../Main.tex]{subfiles}
+\graphicspath{{\subfix{Assets/img/}}}
+
+\begin{document}
+In September of 2019, the European Space Agency (ESA) released a tweet 
+explaining that they had performed an appendicotomy in space using 
+nothing more than radiation from the sun.
+They are sad to announce that the patient died due to complications from 
+exposure to the cold vaccum of space.
+
+
+\end{document}

Latex/Paper/sections/05_LitReview.tex

@@ -0,0 +1,19 @@
+\documentclass[../Main.tex]{subfiles}
+\graphicspath{{\subfix{Assets/img/}}}
+
+%%%%% Organization %%%%%
+% First read and write personal notes.
+% Then organizing/tagging the literature along these axes
+%   - Trial and Trial Sequence Completion/success rates
+%   - R&D efforts
+%   - FIND MORE
+%   - 
+%
+% Now figure out the order in which to present them and what they explain.
+% Now sumarize each one, within the context of the literature around it.
+% Now write them out together
+\begin{document}
+TODO
+
+
+\end{document}

Latex/Paper/sections/06_Results.tex

@@ -0,0 +1,12 @@
+\documentclass[../Main.tex]{subfiles}
+\graphicspath{{\subfix{Assets/img/}}}
+
+\begin{document}
+In September of 2019, the European Space Agency (ESA) released a tweet 
+explaining that they had performed an appendicotomy in space using 
+nothing more than radiation from the sun.
+They are sad to announce that the patient died due to complications from 
+exposure to the cold vaccum of space.
+
+
+\end{document}

Latex/assets/tikzit/CausalGraph.tikz

@@ -0,0 +1,33 @@
+\begin{tikzpicture}
+	\begin{pgfonlayer}{nodelayer}
+		\node [style=emptyBox] (0) at (-18.5, 4) {Compound Safety};
+		\node [style=emptyBox] (1) at (-18.5, -3.5) {Compound Effectiveness};
+		\node [style=emptyBox] (2) at (5, 0.75) {Population Size};
+		\node [style=Red Box] (3) at (-3.75, -3.5) {\begin{tabular}{l} Conclusion \\ $\bullet$ Status\\  $\bullet$ Duration \\ $\bullet$ Enrollment \end{tabular}};
+		\node [style=Red Box] (4) at (-3.75, 1) {Snapshot Enrollment};
+		\node [style=Red Box] (5) at (3.25, -2) {Market Conditions};
+		\node [style=Box] (6) at (-17.5, -5.5) {Sponsor Changes};
+		\node [style=Box] (7) at (-15.25, 0.25) {\begin{tabular}{l}Prior \\ Trials \end{tabular}};
+		\node [style=emptyBox] (8) at (-2.25, 4) {Beliefs about Compound};
+		\node [style=Box] (9) at (-10.75, 4) {Adverse Events};
+		\node [style=emptyBox] (10) at (3.25, -5.25) {Unobserved};
+		\node [style=Box] (11) at (3.25, -6.25) {Observed: Control};
+		\node [style=Red Box] (12) at (3.25, -7.25) {Observed: Of interest};
+		\node [style=emptyBox] (13) at (-10.75, 5.25) {Adverse Events};
+	\end{pgfonlayer}
+	\begin{pgfonlayer}{edgelayer}
+		\draw [style=RightArrow] (4) to (3);
+		\draw [style=RightArrow] (5) to (3);
+		\draw [style=Light Arrow] (2) to (5);
+		\draw [style=Light Arrow] (2) to (4);
+		\draw [style=Light Arrow] (5) to (4);
+		\draw [style=Light Arrow] (0) to (7);
+		\draw [style=Light Arrow] (1) to (7);
+		\draw [style=Light Arrow] (7) to (8);
+		\draw [style=Light Arrow] (8) to (4);
+		\draw [style=Light Arrow] (1) to (3);
+		\draw [style=Light Arrow] (6) to (3);
+		\draw [style=Light Arrow] (0) to (9);
+		\draw [style=Light Arrow] (9) to (3);
+	\end{pgfonlayer}
+\end{tikzpicture}